Pairwise Alignments

Query, 459 a.a., cysteine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., cysteinyl-tRNA synthetase from Agrobacterium fabrum C58

 Score =  360 bits (924), Expect = e-104
 Identities = 213/473 (45%), Positives = 289/473 (61%), Gaps = 40/473 (8%)

Query: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYL-GYD 60
           LK++N+LTR+K EF PI A  V MYVCG T+YD  HIG+ R  + FDV+ R LR++ G D
Sbjct: 5   LKLHNTLTREKSEFAPIDADNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGED 64

Query: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113
            +T+ RNITD+DDKI  RA  +       +   ++T++   + + D  AL   +P VEPR
Sbjct: 65  HVTYARNITDLDDKINARALRDYPHLPLNDAIHAVTKKTADQFHDDVAALGCLQPTVEPR 124

Query: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEA 173
           AT YI E+I L+ERLIERG AY A  G+V+F+    ++YG+LSK+ LD+ QAGARV +EA
Sbjct: 125 ATDYIAEMIYLIERLIERGHAYKA-GGEVLFDTRSMADYGQLSKRPLDEQQAGARVAVEA 183

Query: 174 AKRSPLDFVLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFP 233
            K++P DFVLWK+S   EP WESPWG GRPGWHIECSAM    LG  FDIHGGG DL FP
Sbjct: 184 HKKNPGDFVLWKLSSESEPGWESPWGLGRPGWHIECSAMAGRYLGEVFDIHGGGLDLIFP 243

Query: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------GHYD 285
           HHENEIAQS CAH T  + N WMH+G V V+  KMSKS GNF TI ++L         + 
Sbjct: 244 HHENEIAQSRCAHGTHVMANVWMHNGFVQVEGRKMSKSEGNFVTIYELLHTDKFGGRQWP 303

Query: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAA 345
            E +R  ++  HYR  +++S + L +A    ERL +     + S  AA  +E V     A
Sbjct: 304 GEVLRLAMLMTHYREPIDFSVKRLEEA----ERLLSKWPAAETSDAAA--DETVLE---A 354

Query: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGS 405
           + DD NT  A   L  +A   N       T+ S L +     A ++G+L ++ E      
Sbjct: 355 LADDLNTVAAVQALHALAHAAN-------TDPSRLPAFAASAA-LLGVLPKKTE------ 400

Query: 406 AEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNGTTWRR 458
            ++   + ++AL++LR +    K++A AD  RD+L+E GI L+DG +  T  R
Sbjct: 401 MDEAIVSAVDALVELRLEMLKAKNFAEADRLRDELSEKGIQLKDGKDKETGER 453