Pairwise Alignments

Query, 173 a.a., crossover junction endodeoxyribonuclease RuvC from Vibrio cholerae E7946 ATCC 55056

Subject, 173 a.a., Holliday junction endonuclease RuvC (EC 3.1.22.4) from Enterobacter asburiae PDN3

 Score =  243 bits (620), Expect = 1e-69
 Identities = 125/173 (72%), Positives = 142/173 (82%)

Query: 1   MSVILGIDPGSRVTGYGVIRQQGRHLIYLGSGCIRTSDLELPLRLKQIYAGVSEIITQFQ 60
           MS+ILGIDPGSRVTGYGVIRQ GR L YLGSGCIRT   +LP RLK IYAGVSEIITQFQ
Sbjct: 1   MSIILGIDPGSRVTGYGVIRQVGRQLTYLGSGCIRTKVDDLPSRLKLIYAGVSEIITQFQ 60

Query: 61  PDAFAIEQVFMAKNADSALKLGQARGSAIVAAVNAELPVYEYAARLIKQAVVGTGAADKS 120
           PD FAIEQVFMAKNADSALKLGQARG AIVAAVN +LPV+EYAAR +KQ VVG G+A+KS
Sbjct: 61  PDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQDLPVFEYAARQVKQTVVGIGSAEKS 120

Query: 121 QVQHMVQQMLKLPGKPQADAADALGVAICHANTNKTLIALAGQATSARRGRYR 173
           QVQHMV+ +LKLP  PQADAADAL +AI H + ++  + ++    +  RGR R
Sbjct: 121 QVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQMSESRLNLARGRLR 173