Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 198 a.a., Holliday junction branch migration protein RuvA from Rhodanobacter sp000427505 FW510-R12

 Score =  186 bits (473), Expect = 2e-52
 Identities = 95/202 (47%), Positives = 134/202 (66%), Gaps = 8/202 (3%)

Query: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60
           MIGRLRG LI K PP +L+EVGG+GYEV+ PMS IY+LP +G+E ++  H  V+ED+  L
Sbjct: 1   MIGRLRGILISKQPPSLLVEVGGVGYEVEAPMSTIYDLPGLGKEVVLLIHHAVKEDSITL 60

Query: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120
           YGF   +ER LFR ++K +G+G K+ LA+LSG++ + F   V+  D+  L K+PG+GKKT
Sbjct: 61  YGFLHEAERVLFRNLLKVSGIGAKIALAVLSGVSTDHFARLVQAGDVVALTKIPGIGKKT 120

Query: 121 AERLVVEMKDRLKGWGAGDLFTPATDAAPVDSTPVIAQNAQEEAMSALLALGYKPPQASK 180
           AER+VVE++DR+ G          T  AP+D        A  EA  AL  LGYKP + ++
Sbjct: 121 AERIVVELRDRVDGLSGMPGAALRTAGAPLD--------AAGEAAVALQQLGYKPAEVAR 172

Query: 181 AVSQVAKAGMSSEELIREALKS 202
            V +VA  G  +E +IR+AL++
Sbjct: 173 LVQKVAADGDGAEAIIRKALRA 194