Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 206 a.a., Holliday junction ATP-dependent DNA helicase RuvA from Xanthobacter sp. DMC5

 Score =  127 bits (320), Expect = 1e-34
 Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 5/206 (2%)

Query: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60
           MIG+L+G + E      +I+V G+GY V      +  LP  GE   ++    VREDA  L
Sbjct: 1   MIGKLKGVVDELNEDHAIIDVHGVGYLVHCSGRTLSALPRAGEATALFIETHVREDAIRL 60

Query: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120
           +GF + +ER  FR +    G+G K  LA+LS +TA++    +   D +T+ + PGVG + 
Sbjct: 61  FGFASAAERDWFRLLQGVQGIGTKTALAVLSTLTASELTQAIALGDKTTVARAPGVGPRV 120

Query: 121 AERLVVEMKDRLKGWGAGDLFTPATDAAPVDSTPVIAQNAQEEAMSALLALGYKPPQASK 180
           A R++ E+KD++ G+GAG +       AP  +   +A  A  +AMSAL+ LGY  PQA+ 
Sbjct: 121 ATRIITELKDKMPGFGAGSVSLADIGGAP--AAAPVAGGAAADAMSALVNLGYGAPQANA 178

Query: 181 AVSQVAKAG---MSSEELIREALKSM 203
           A++   ++      +E LIR  LK +
Sbjct: 179 AIAAALRSAGEDAKTETLIRLGLKEL 204