Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 205 a.a., Holliday junction ATP-dependent DNA helicase RuvA from Pseudomonas putida KT2440

 Score =  226 bits (575), Expect = 3e-64
 Identities = 113/207 (54%), Positives = 155/207 (74%), Gaps = 7/207 (3%)

Query: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60
           MIGRLRGTL EK PP ++I+V G+GYE+++PM+ +Y LP +GE   ++TH VVREDA LL
Sbjct: 1   MIGRLRGTLAEKQPPHLIIDVNGVGYELEVPMTTLYRLPKVGETVTVHTHLVVREDAHLL 60

Query: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120
           YGF    ER LFRE+I+ NGVGPK+ LA++SG+  ++ V CV+ +D S L+++PGVGKKT
Sbjct: 61  YGFAEKRERELFRELIRLNGVGPKLALALMSGLEVDELVRCVQAQDTSALVRVPGVGKKT 120

Query: 121 AERLVVEMKDRLKGWGAGD-LFTPATDA-APVDSTPVIAQNAQEEAMSALLALGYKPPQA 178
           AERL+VE+KDR K W     +FT  +D   PV S      +A+ +A+SAL++LGYKP +A
Sbjct: 121 AERLLVELKDRFKAWETSPAMFTLVSDGPLPVAS----ESSAEADAVSALVSLGYKPQEA 176

Query: 179 SKAVSQVA-KAGMSSEELIREALKSMV 204
           SKA++ +  KAG+SSEELIR +LK M+
Sbjct: 177 SKAIAAIKDKAGLSSEELIRRSLKGMI 203