Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., Holliday junction branch migration protein RuvA from Magnetospirillum magneticum AMB-1

 Score = 97.8 bits (242), Expect = 1e-25
 Identities = 70/211 (33%), Positives = 108/211 (51%), Gaps = 13/211 (6%)

Query: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60
           MI +L+G +        +++  G+GY V      +  L   G  A ++    VREDA  L
Sbjct: 1   MIAKLKGLIDSLGDDWAVVDCNGVGYLVACSSKTLARLET-GTAAALFVETQVREDAISL 59

Query: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120
           +GF    ER  FR +    GVG K+ LAILS  + +Q +  +  +D + L +  GVG K 
Sbjct: 60  FGFLETGERDWFRLLTTVQGVGAKVALAILSVASPDQLLQIIAAQDKAGLTRANGVGPKL 119

Query: 121 AERLVVEMKDR-----LKGWGAGDLFTPATDAAPVDSTPVIAQNAQEEAMSALLALGYKP 175
           A R++ E+KD+     L G+  G +    + +AP+ +    A    E+A+SAL+ LGYK 
Sbjct: 120 AVRILTELKDKAGKIALGGFSPGGIKDALSASAPLPA----ASGRMEDAVSALVNLGYKR 175

Query: 176 PQASKAVSQVAKA---GMSSEELIREALKSM 203
            +A +AV + A+       S  LIR ALK +
Sbjct: 176 LEAFQAVGETARELGDEADSSALIRAALKHL 206