Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 203 a.a., Holliday junction branch migration protein RuvA from Escherichia coli ECOR38

 Score =  266 bits (679), Expect = 3e-76
 Identities = 130/202 (64%), Positives = 161/202 (79%), Gaps = 1/202 (0%)

Query: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60
           +IGRLRG +IEK PP +LIEVGG+GYEV MPM+C YELP  G+EAI++THFVVREDAQLL
Sbjct: 1   VIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60

Query: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120
           YGFN   ER LF+E+IK NGVGPK+ LAILSGM+A QFV  VE+E++  L+KLPG+GKKT
Sbjct: 61  YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120

Query: 121 AERLVVEMKDRLKGWGAGDLFTPATDAAPVDSTPVIAQNAQEEAMSALLALGYKPPQASK 180
           AERL+VEMKDR KG   GDLFTPA D            +A++EA++AL+ALGYKP +AS+
Sbjct: 121 AERLIVEMKDRFKGL-HGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179

Query: 181 AVSQVAKAGMSSEELIREALKS 202
            VS++A+   SSE LIREAL++
Sbjct: 180 MVSKIARPDASSETLIREALRA 201