Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 205 a.a., Holliday junction branch migration protein RuvA from Dickeya dadantii 3937

 Score =  253 bits (647), Expect = 1e-72
 Identities = 129/204 (63%), Positives = 161/204 (78%), Gaps = 3/204 (1%)

Query: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60
           MIGRLRG ++EK PP +LIE  G+GYEV MPM+C YELP++G+EA+I+THFVVREDAQLL
Sbjct: 1   MIGRLRGIVLEKQPPLVLIEASGVGYEVHMPMTCFYELPDLGQEAVIFTHFVVREDAQLL 60

Query: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120
           +GFN   ER+LFRE+IK NGVGPK+ LAILSGM+A QFV+ VE+++I+ L+KLPGVGKKT
Sbjct: 61  FGFNNKQERSLFRELIKVNGVGPKLALAILSGMSAQQFVSAVERQEINALVKLPGVGKKT 120

Query: 121 AERLVVEMKDRLKGWGAGDLFTPATDAAPVDSTPVIAQNA--QEEAMSALLALGYKPPQA 178
           AERLVVEMKDR KG   GDLF  A+D A  ++       A  Q EA +AL+ALGYKP +A
Sbjct: 121 AERLVVEMKDRFKGLN-GDLFNAASDIALPEAAGKAEPEADPQAEAEAALVALGYKPQEA 179

Query: 179 SKAVSQVAKAGMSSEELIREALKS 202
            + VS+VA+ G   E LIREAL++
Sbjct: 180 GRMVSKVARPGADCETLIREALRA 203