Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 199 a.a., Holliday junction DNA helicase, RuvA subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  120 bits (301), Expect = 2e-32
 Identities = 73/206 (35%), Positives = 121/206 (58%), Gaps = 12/206 (5%)

Query: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAI-IYTHFVVREDAQL 59
           MI  L+G L+ K P  ++I++ G+GY V++ ++   ++ +  EE I + TH  ++EDA  
Sbjct: 1   MIDYLKGKLVFKDPTFVIIDINGVGYHVKVSLNTYSQIKD--EEHIKLLTHLHIKEDAHT 58

Query: 60  LYGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKK 119
           LYGF    E+ LF  +I  +GVGP  GL ILS ++  +  T + +ED  T+ ++ GVG K
Sbjct: 59  LYGFKEEMEKRLFLLLISISGVGPNTGLMILSSLSGGELETAISQEDHKTIQRVKGVGAK 118

Query: 120 TAERLVVEMKDRLKGWGAGDLFTPATDAAPVDSTPVIAQNAQEEAMSALLALGYKPPQAS 179
           TA+R+V+E+KD++      +L  P   +          Q+ +EEA+ AL+ LG+    A 
Sbjct: 119 TAQRIVLELKDKI---NKENLAEPQVVSGGFIQQ---QQHLKEEALQALITLGFTKAMAE 172

Query: 180 KAVSQVAK---AGMSSEELIREALKS 202
           K ++ V K   + +S EELI+ +L+S
Sbjct: 173 KNIASVLKKSGSEISLEELIKASLRS 198