Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 200 a.a., Holliday junction branch migration protein RuvA from Bacteroides stercoris CC31F

 Score =  101 bits (251), Expect = 1e-26
 Identities = 65/205 (31%), Positives = 108/205 (52%), Gaps = 7/205 (3%)

Query: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60
           MI  ++G + E  P   +I+  G+GY   + ++  Y      +   +Y +  +REDA +L
Sbjct: 1   MIEYIKGEIAELSPASAIIDCNGLGYAANISLNT-YAAIQGKKSCKLYIYEAIREDAYVL 59

Query: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120
           YGF    ER LF  +I  +G+G      ILS ++ ++ +  +  E+ + L  + G+G KT
Sbjct: 60  YGFADKQERELFLLLISVSGIGGNTARMILSALSPSELINVISTENANLLKTVKGIGLKT 119

Query: 121 AERLVVEMKDRLKGWGAGDLFTPATDAAPVDSTPVIAQNAQEEAMSALLALGYKPPQASK 180
           A+R++V++KD++K  G     T  T  A   ST    Q  QEEA++AL  LG+    + K
Sbjct: 120 AQRVIVDLKDKIKTSGEAAGTTGITGLA---STAANVQ-VQEEAVAALTMLGFAQAPSQK 175

Query: 181 AVSQVAK--AGMSSEELIREALKSM 203
            V  + K   G   E++I+ ALK +
Sbjct: 176 VVMAILKEDTGAPVEQVIKLALKRL 200