Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 206 a.a., Holliday junction ATP-dependent DNA helicase RuvA from Alteromonas macleodii MIT1002

 Score =  253 bits (646), Expect = 2e-72
 Identities = 127/206 (61%), Positives = 160/206 (77%), Gaps = 2/206 (0%)

Query: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60
           MIGR+RGTL EK PP+IL++V G+GYE+ MPM+  Y+LP +GEE ++YTHFVVREDAQLL
Sbjct: 1   MIGRIRGTLAEKQPPEILVDVAGVGYEIHMPMTSFYQLPAVGEEVVVYTHFVVREDAQLL 60

Query: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120
           +GF    ER LFRE+IKANGVGPK+GLAILSGM+A+QF+  V+ ED+S L+ LPG+GKKT
Sbjct: 61  FGFADKMERGLFRELIKANGVGPKLGLAILSGMSASQFLASVQNEDVSALVSLPGIGKKT 120

Query: 121 AERLVVEMKDRLKGWG-AGDLFTPATDAAPVDSTPVIAQN-AQEEAMSALLALGYKPPQA 178
           AERLVVE+KDRL  +G A  +  P      + +  ++A N A+EEA SAL+ALGYKP QA
Sbjct: 121 AERLVVELKDRLAKFGKAQSIAVPPPSGDLLSTNTIVAVNDAREEAQSALIALGYKPAQA 180

Query: 179 SKAVSQVAKAGMSSEELIREALKSMV 204
           SK V  V K GM SE LIRE+LK+ +
Sbjct: 181 SKLVDSVYKEGMESEALIRESLKAAI 206