Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., replication-associated recombination protein A from Rhodanobacter sp000427505 FW510-R12

 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 71/261 (27%), Positives = 106/261 (40%), Gaps = 44/261 (16%)

Query: 25  IRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANEMGVN 84
           +RP+ L +  GQ  +    +   +A +  +  +  ++++GPPG GKTTLA +VA     +
Sbjct: 26  MRPRSLDEIVGQQRLVGPDKALRRALEAGK--IHSMVLWGPPGCGKTTLALLVARYADAD 83

Query: 85  IRTTSGPVLEKAGDLAALLTNLEEN------DVLFIDEIHRLSPMVEEVLYPAMEDYQLD 138
            R  S  VL    D+   L   E N       VLF+DE+HR +   ++   P +E     
Sbjct: 84  FRAISA-VLSGLPDVRKALAEAELNFTQGRRTVLFVDEVHRFNKTQQDAFLPHIE----- 137

Query: 139 IMIGEGPAARSIKIDLPPFTLIGATTRAGS--LTSPLRDRFGIVQRLEYYKVADLQHIV- 195
                    R + I       IGATT   S  L S L  R   V  LE     D+   + 
Sbjct: 138 ---------RGVII------FIGATTENPSFELNSALLSRCR-VHVLEPVSTGDIIAALK 181

Query: 196 ------QRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVK--GDGHICAQ 247
                 +R    L L +  E    +A+ A G  R A  LL    + AE +   +  +   
Sbjct: 182 RALVDDERGLGALQLQVSEEALDSIAQAADGDVRRALTLLEIAAELAEDRRIDEATLTQV 241

Query: 248 TADRALNMLDVDHQGFDYMDR 268
            ADR       D QG  + D+
Sbjct: 242 LADRTRRF---DKQGEQFYDQ 259