Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., ATP-dependent DNA helicase RuvB from Pseudomonas simiae WCS417

 Score =  494 bits (1271), Expect = e-144
 Identities = 250/332 (75%), Positives = 284/332 (85%), Gaps = 1/332 (0%)

Query: 1   MIEADRLIAPISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHL 60
           MIEADRLIA      + EEV DRAIRP  LA+Y GQ  VR+QME+FIQAA+ R E+LDH 
Sbjct: 1   MIEADRLIAATGPRDR-EEVQDRAIRPLSLAEYIGQPTVREQMELFIQAARGRSESLDHT 59

Query: 61  LIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL 120
           LIFGPPGLGKTTLANI+A EMGV+I++TSGPVLE+ GDLAALLTNLE +DVLFIDEIHRL
Sbjct: 60  LIFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHRL 119

Query: 121 SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIV 180
           SP+VEEVLYPAMED+QLDIMIGEGPAARSIK+DLPPFTL+GATTRAG LT+PLRDRFGIV
Sbjct: 120 SPIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIV 179

Query: 181 QRLEYYKVADLQHIVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKG 240
           QRLE+Y  ADL  IV RSA  LGL +D EGA E+ARRARGTPRIANRLLRRVRD+AEV+ 
Sbjct: 180 QRLEFYSTADLATIVSRSASILGLPLDPEGAFEIARRARGTPRIANRLLRRVRDFAEVRA 239

Query: 241 DGHICAQTADRALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIE 300
            GHI    AD ALN+LDVD  GFD+ DR+LLL ++EKF GGPVG+D+LAAAI EE+ TIE
Sbjct: 240 KGHITKAVADLALNLLDVDEHGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIE 299

Query: 301 DVLEPFLIQQGYLQRTPRGRIATDRAYLHFGI 332
           DVLEP+LIQQGY+ RTPRGR+ T  AYLHFG+
Sbjct: 300 DVLEPYLIQQGYIMRTPRGRVVTRHAYLHFGL 331