Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) from Variovorax sp. SCN45

 Score =  461 bits (1185), Expect = e-134
 Identities = 230/316 (72%), Positives = 271/316 (85%)

Query: 17  DEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANI 76
           +EE I+RA+RPK L +Y GQ  VR+Q+EIFI AA+ R+EALDH+L+FGPPGLGKTTL++I
Sbjct: 24  NEEAIERALRPKLLDEYVGQAKVREQLEIFIGAARKRKEALDHVLLFGPPGLGKTTLSHI 83

Query: 77  VANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQ 136
           +A E+GVN+R TSGPVLEK  DLAALLTNLE NDVLFIDEIHRLSP+VEE+LYPA+EDYQ
Sbjct: 84  IAAELGVNLRQTSGPVLEKPKDLAALLTNLEPNDVLFIDEIHRLSPVVEEILYPALEDYQ 143

Query: 137 LDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEYYKVADLQHIVQ 196
           +DIMIGEGPAARSIK+DL PFTL+GATTRAG LT+PLRDRFGIV RLE+Y   +L  IV+
Sbjct: 144 IDIMIGEGPAARSIKLDLQPFTLVGATTRAGMLTNPLRDRFGIVARLEFYTPEELALIVR 203

Query: 197 RSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGHICAQTADRALNML 256
           RSA  L +  D+ G  E+ARR+RGTPRIANRLLRRVRDYAEVKG+G I    A +AL ML
Sbjct: 204 RSAGLLKVETDAAGGFEIARRSRGTPRIANRLLRRVRDYAEVKGNGRITEDIAHKALAML 263

Query: 257 DVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIEDVLEPFLIQQGYLQRT 316
           DVD QGFD MDRKLL A++ +F GGPVG+DN+AA+IGEE+DTIEDV+EP+LIQQGYLQRT
Sbjct: 264 DVDPQGFDLMDRKLLEAVIHRFDGGPVGLDNVAASIGEERDTIEDVIEPYLIQQGYLQRT 323

Query: 317 PRGRIATDRAYLHFGI 332
           PRGRIAT  AY H G+
Sbjct: 324 PRGRIATLAAYRHLGV 339