Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., Replication-associated recombination protein RarA from Sphingobium sp. HT1-2

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 9/116 (7%)

Query: 25  IRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANEMGVN 84
           +RP  LAD  GQ+H+            +    L  +L +GPPG GKTT++ ++A+ +G+ 
Sbjct: 24  LRPAVLADVVGQEHLTGPDGAI--GRMVAAGRLSSILFWGPPGTGKTTISRLLADAVGMR 81

Query: 85  IRTTSGPVLEKAGDLAALLTNLE------ENDVLFIDEIHRLSPMVEEVLYPAMED 134
               S  V     DL  +    +      E  +LF+DEIHR +   ++   P +ED
Sbjct: 82  FEPISA-VFSGVADLKKVFAAAKDHGRRGEKTLLFVDEIHRFNRAQQDSFLPFVED 136