Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., Holliday junction branch migration DNA helicase RuvB from Magnetospirillum magneticum AMB-1

 Score =  391 bits (1004), Expect = e-113
 Identities = 193/327 (59%), Positives = 254/327 (77%), Gaps = 4/327 (1%)

Query: 6   RLIAPISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGP 65
           R+++P  N   D E+   ++RP+ L D+ GQ  V + +++FI AA+ R EALDH+L  GP
Sbjct: 4   RVVSPEQNP-NDAEM---SLRPQSLDDFVGQRQVCENLKVFISAARARGEALDHVLFHGP 59

Query: 66  PGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMVE 125
           PGLGKTTLA I+A E+GV  R TSGPV+++AGDLAALLTNLE  DVLFIDEIHRL+P +E
Sbjct: 60  PGLGKTTLAQIMARELGVGFRATSGPVIQRAGDLAALLTNLEPRDVLFIDEIHRLNPAIE 119

Query: 126 EVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEY 185
           EVLYPAMED+QLD++IGEGPAARS++I+LPPFTL+GATTR+G LT+PLR+RFGI  R+ +
Sbjct: 120 EVLYPAMEDFQLDLIIGEGPAARSVRIELPPFTLVGATTRSGLLTTPLRERFGIPCRMNF 179

Query: 186 YKVADLQHIVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGHIC 245
           Y+ A+L+ IV R A+ LG ++  +GA EVARR+RGTPR+A RLLRRVRD+A V G   + 
Sbjct: 180 YEPAELEAIVSRGARVLGFALTPDGAAEVARRSRGTPRVAGRLLRRVRDFAVVAGRSPVD 239

Query: 246 AQTADRALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIEDVLEP 305
           A  AD ALN L+VD  G D MDR+ L  I E + GGPVG++ LAAA+ E +DT+E+V+EP
Sbjct: 240 ALVADAALNRLEVDRIGLDAMDRRYLRCIAENYGGGPVGVETLAAALSESRDTLEEVVEP 299

Query: 306 FLIQQGYLQRTPRGRIATDRAYLHFGI 332
           +L+QQG +QRTPRGR+ +   + H G+
Sbjct: 300 YLLQQGMIQRTPRGRMLSASGFKHIGL 326