Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., FIG065221: Holliday junction DNA helicase from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 64.3 bits (155), Expect = 6e-15
 Identities = 64/251 (25%), Positives = 105/251 (41%), Gaps = 39/251 (15%)

Query: 8   IAPISNHFKDE--EVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGP 65
           ++ +S  F D   + +   +RP+ LA Y GQ H+    +   +A +     L  ++++GP
Sbjct: 1   VSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGH--LHSMILWGP 58

Query: 66  PGLGKTTLANIVANEMGVNIR----TTSG-PVLEKAGDLAALLTNLEENDVLFIDEIHRL 120
           PG GKTTLA ++A     ++      TSG   + +A + A    N     +LF+DE+HR 
Sbjct: 59  PGTGKTTLAEVIARYASADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRF 118

Query: 121 SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGS--LTSPLRDRFG 178
           +   ++   P +ED  +                    T IGATT   S  L S L  R  
Sbjct: 119 NKSQQDAFLPHIEDGTI--------------------TFIGATTENPSFELNSALLSR-A 157

Query: 179 IVQRLEYYKVADLQHIVQRSAQ-------CLGLSMDSEGALEVARRARGTPRIANRLLRR 231
            V  L+     D++ ++ ++ Q          + +  E    +A    G  R A   L  
Sbjct: 158 RVYLLKSLTTDDIEQVLDQAMQDKTRGYGDQDIVLPDETRRAIAELVNGDARRALNTLEM 217

Query: 232 VRDYAEVKGDG 242
           + D AE    G
Sbjct: 218 MADMAEADDSG 228