Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., recombination protein (NCBI) from Escherichia coli BW25113

 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 37/232 (15%)

Query: 25  IRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANEMGVN 84
           +RP+ LA Y GQ H+    +   +A +     L  ++++GPPG GKTTLA ++A     +
Sbjct: 20  MRPENLAQYIGQQHLLAAGKPLPRAIEAGH--LHSMILWGPPGTGKTTLAEVIARYANAD 77

Query: 85  IR----TTSG-PVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQLDI 139
           +      TSG   + +A + A    N     +LF+DE+HR +   ++   P +ED  +  
Sbjct: 78  VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTI-- 135

Query: 140 MIGEGPAARSIKIDLPPFTLIGATTRAGS--LTSPLRDRFGIVQRLEYYKVADLQHIVQR 197
                             T IGATT   S  L S L  R   V  L+     D++ ++ +
Sbjct: 136 ------------------TFIGATTENPSFELNSALLSR-ARVYLLKSLSTEDIEQVLTQ 176

Query: 198 SAQ-------CLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDG 242
           + +          + +  E    +A    G  R A   L  + D AEV   G
Sbjct: 177 AMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSG 228