Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., replication-associated recombination protein A from Erwinia tracheiphila SCR3

 Score = 61.6 bits (148), Expect = 3e-14
 Identities = 64/231 (27%), Positives = 101/231 (43%), Gaps = 35/231 (15%)

Query: 25  IRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANEMGVN 84
           +RP+ L +Y GQ H+    +   +A +     L  ++++GPPG GKTTLA I+A+     
Sbjct: 1   MRPRTLVEYIGQQHLLAAGKPLPRAIEAGH--LHSMILWGPPGTGKTTLAEIIAHYAYAG 58

Query: 85  IR----TTSG-PVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQLDI 139
           +      TSG   + +A + A    +     +LF+DE+HR +   ++   P +ED  +  
Sbjct: 59  VERISAVTSGVKEIREAIERARQNRDAGHRTILFVDEVHRFNKSQQDAFLPHIEDGTI-- 116

Query: 140 MIGEGPAARSIKIDLPPFTLIGATTRAGS--LTSPL--RDRFGIVQRLEYYKV-ADLQHI 194
                             T IGATT   S  L S L  R R  +++ L   ++ A L   
Sbjct: 117 ------------------TFIGATTENPSFELNSALLSRARVYLLKSLTSEEIEAVLGQA 158

Query: 195 VQRSAQCLG---LSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDG 242
           +Q   +  G   + + +E    VA    G  R A   L  + D AEV   G
Sbjct: 159 MQDKERGYGNENIRLPAETCKTVAALVNGDARRALNTLEMMADMAEVNSTG 209