Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., replication-associated recombination protein A from Dickeya dianthicola ME23

 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 47/263 (17%)

Query: 25  IRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIV-----AN 79
           +RP  LA Y GQ H+    +   +A +  Q  L  ++++GPPG GKTTLA ++     A+
Sbjct: 20  MRPVTLAQYIGQQHLLGPGKPLPRAIEAGQ--LHSMILWGPPGTGKTTLAELIGRYGHAD 77

Query: 80  EMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQLDI 139
              ++  T+    + +A + A    +     +LF+DE+HR +   ++   P +ED  +  
Sbjct: 78  VERISAVTSGIKEIREAIERARQNRDAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTI-- 135

Query: 140 MIGEGPAARSIKIDLPPFTLIGATTRAGS--LTSPLRDRFGIVQRLEYYKVADLQHIVQR 197
                             T IGATT   S  L S L  R   V  L+     D++ ++++
Sbjct: 136 ------------------TFIGATTENPSFELNSALLSR-ARVYLLKALSAEDIEQVLEQ 176

Query: 198 SAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGHICAQTADRALNMLD 257
           + Q      D+E  L    +    P    RLL  +     V GD        +   +M +
Sbjct: 177 AMQ------DTERGL--GGQQIVLPDETRRLLAEL-----VNGDARRSLNLLEMMADMAE 223

Query: 258 VDHQGFDYMDRKLLLAIMEKFSG 280
           VD  G     R L LA++++ SG
Sbjct: 224 VDASG----QRLLTLALLKEISG 242