Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., Holliday junction DNA helicase, RuvB subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  375 bits (962), Expect = e-108
 Identities = 188/311 (60%), Positives = 235/311 (75%)

Query: 22  DRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANEM 81
           ++A+RP    D+ GQ  + D +++F+ AA+ R E+LDH+L+ GPPGLGKTTL++I+ANE+
Sbjct: 21  EKALRPLSFDDFTGQQKIVDNIQVFVMAAKKRGESLDHVLLHGPPGLGKTTLSHIIANEL 80

Query: 82  GVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQLDIMI 141
             +++ TSGPVL+K  DLA LLTNLEE DVLFIDEIHRL+ +VEE LY AMED+++DIM+
Sbjct: 81  ESSLKITSGPVLDKPSDLAGLLTNLEEGDVLFIDEIHRLNAVVEEYLYSAMEDFRIDIML 140

Query: 142 GEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEYYKVADLQHIVQRSAQC 201
             GP ARS++I L PFTLIGATTR+G LTSPLR RFGI  RLEYY    L  IV RSA  
Sbjct: 141 DSGPNARSVQISLNPFTLIGATTRSGLLTSPLRARFGINARLEYYDAKLLTTIVTRSANI 200

Query: 202 LGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGHICAQTADRALNMLDVDHQ 261
           LG  +D   A E+ARR+RGTPRIAN LLRR RD+A++KG+G I    A  AL+ LDVD  
Sbjct: 201 LGAPIDEVAAYEIARRSRGTPRIANTLLRRTRDFADIKGNGTITLDIAKVALDALDVDEN 260

Query: 262 GFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIEDVLEPFLIQQGYLQRTPRGRI 321
           G D MD ++L  I+EKF GGPVGI  +A A GEE +TIE+V EPFLIQ+GYL+RT RGRI
Sbjct: 261 GLDEMDNRILTTIIEKFKGGPVGISTIATACGEEGETIEEVYEPFLIQEGYLKRTSRGRI 320

Query: 322 ATDRAYLHFGI 332
           AT+ AY H  I
Sbjct: 321 ATELAYKHLNI 331