Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Azospirillum sp. SherDot2

 Score =  399 bits (1024), Expect = e-116
 Identities = 196/328 (59%), Positives = 254/328 (77%), Gaps = 3/328 (0%)

Query: 5   DRLIAPISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFG 64
           DRL+ P   H    E    +IRP  LA++ GQ   R+ + IFIQAA+ R EALDH+L+FG
Sbjct: 7   DRLVQPGQGHGDSAEA---SIRPLSLAEFIGQRQARENLSIFIQAARSRNEALDHVLLFG 63

Query: 65  PPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMV 124
           PPGLGKTTLA IVA E+GV  R TSGPV+ +AGDLAALLTNL+ +DVLFIDEIHRL+P V
Sbjct: 64  PPGLGKTTLAQIVARELGVGFRATSGPVIARAGDLAALLTNLQPHDVLFIDEIHRLNPAV 123

Query: 125 EEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLE 184
           EEVLYPAMED+QLD++IGEGP+ARSI+IDLPPFTL+GATTR+G +T PLR+RFGI  RL+
Sbjct: 124 EEVLYPAMEDFQLDLIIGEGPSARSIRIDLPPFTLVGATTRSGLITRPLRERFGIPVRLQ 183

Query: 185 YYKVADLQHIVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGHI 244
           +Y+  +L+ IV+R+A  LG+ +  EGA E+A RARGTPR++ RLLRRVRD+A V G   +
Sbjct: 184 FYEPDELELIVRRAAGVLGMGITPEGAREIANRARGTPRVSGRLLRRVRDFAAVAGVEEV 243

Query: 245 CAQTADRALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIEDVLE 304
             + AD AL  L+VD  G D MDR+ L  +   + GGPVG++ L AA+GE++D +E+V+E
Sbjct: 244 DKRVADAALTRLEVDRLGLDSMDRRYLGLVANNYGGGPVGVETLGAALGEQRDVLEEVVE 303

Query: 305 PFLIQQGYLQRTPRGRIATDRAYLHFGI 332
           P+LIQQG+LQRTPRGR+ TD+ + + G+
Sbjct: 304 PYLIQQGFLQRTPRGRMLTDQGFRYLGL 331