Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., Replication-associated recombination protein A from Alteromonas macleodii MIT1002

 Score = 60.1 bits (144), Expect = 1e-13
 Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 43/247 (17%)

Query: 25  IRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDH-LLIFGPPGLGKTTLANIVANEMGV 83
           +RP  +  Y GQ+H+  + +      +M +    H ++++GPPG GKTTLA ++A     
Sbjct: 15  MRPVTIEQYSGQEHLLGEGK---PLRKMLEAGHCHSMILWGPPGTGKTTLAELIAQYTNA 71

Query: 84  NIRTTSGPVLEKAGDLAALLTNLEEN------DVLFIDEIHRLSPMVEEVLYPAMEDYQL 137
           ++   S  V     D+ A +   EEN       +LF+DE+HR +   ++   P +E   +
Sbjct: 72  SVLRISA-VTSGVKDIRAAMDTAEENARYNQRTLLFVDEVHRFNKSQQDAFLPFVESGVV 130

Query: 138 DIMIGEGPAARSIKIDLPPFTLIGATTRAGS--LTSPL--RDRFGIVQRLEYYKVADLQH 193
                               T IGATT   S  L   L  R R  +++ LE+  +++L  
Sbjct: 131 --------------------TFIGATTENPSFELNKALLSRVRVYVLKTLEHEALSELID 170

Query: 194 IVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGHICAQTADRAL 253
              R  +  GL   + G  E AR A     ++    RR+  Y E+  D      T    +
Sbjct: 171 RALRDTE-KGLGDRALGIEETARNA--LIDLSGGDARRLLTYLELAAD-----FTGANEI 222

Query: 254 NMLDVDH 260
            + DV+H
Sbjct: 223 TVSDVEH 229