Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Alteromonas macleodii MIT1002

 Score =  532 bits (1371), Expect = e-156
 Identities = 271/331 (81%), Positives = 297/331 (89%), Gaps = 2/331 (0%)

Query: 1   MIEADRLIAPISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHL 60
           MIEADRLI P ++   ++EVIDRAIRPK L DY GQ HV +QMEIFIQAA+ R +ALDHL
Sbjct: 1   MIEADRLITPEAS--TEDEVIDRAIRPKMLEDYTGQPHVCEQMEIFIQAARNRDDALDHL 58

Query: 61  LIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL 120
           LIFGPPGLGKTTLANIVANEMGVNI+TTSGPVLEKAGDLAALLTNLE NDVLFIDEIHRL
Sbjct: 59  LIFGPPGLGKTTLANIVANEMGVNIKTTSGPVLEKAGDLAALLTNLERNDVLFIDEIHRL 118

Query: 121 SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIV 180
           SP+VEE+LYPAMEDYQLDIMIGEGPAARSIK+DLPPFTL+GATTRAGSLTSPLRDRFGIV
Sbjct: 119 SPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIV 178

Query: 181 QRLEYYKVADLQHIVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKG 240
           QRLE+Y V DL  IV RSA  L L M+ EGA EVARR+RGTPRIANRLLRRVRDYAE+K 
Sbjct: 179 QRLEFYNVKDLTSIVARSASYLNLDMNDEGAQEVARRSRGTPRIANRLLRRVRDYAEIKA 238

Query: 241 DGHICAQTADRALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIE 300
           DG + A TA +AL+MLDVD +GFDYMDRKLL AI+EKF GGPVG+DNLAAAIGEEK+TIE
Sbjct: 239 DGTVGADTAAKALDMLDVDKEGFDYMDRKLLTAIIEKFDGGPVGLDNLAAAIGEEKETIE 298

Query: 301 DVLEPFLIQQGYLQRTPRGRIATDRAYLHFG 331
           DV+EPFLIQQG+LQRTPRGRI + RAYLHFG
Sbjct: 299 DVIEPFLIQQGFLQRTPRGRIVSQRAYLHFG 329