Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., Holliday junction DNA helicase RuvB from Agrobacterium fabrum C58

 Score =  397 bits (1021), Expect = e-115
 Identities = 202/333 (60%), Positives = 252/333 (75%), Gaps = 4/333 (1%)

Query: 1   MIEADRLIAPISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHL 60
           M +ADRLI P     K  E ID  +RP+ L D+ GQ   R  +++FI+AA+ R EALDH+
Sbjct: 1   MSDADRLITPE----KRGEDIDTTLRPQSLDDFTGQAEARANLKVFIEAAKNRGEALDHV 56

Query: 61  LIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL 120
           L  GPPGLGKTTLA I+A E+GVN ++TSGPV+ KAGDLAALLTNLEE DVLFIDEIHRL
Sbjct: 57  LFVGPPGLGKTTLAQIMAKELGVNFKSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRL 116

Query: 121 SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIV 180
           +P VEE+LYPAMED+QLD++IGEGPAARS+KIDL  FTL+ ATTR G LT+PLRDRFGI 
Sbjct: 117 NPAVEEILYPAMEDFQLDLIIGEGPAARSVKIDLSKFTLVAATTRLGLLTTPLRDRFGIP 176

Query: 181 QRLEYYKVADLQHIVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKG 240
            RL +Y V +L+ IV+R A+ +GL+M   GA E+ARRARGTPRIA RLLRRVRD+AEV  
Sbjct: 177 VRLAFYTVDELELIVRRGARLMGLNMTDGGAREIARRARGTPRIAGRLLRRVRDFAEVAR 236

Query: 241 DGHICAQTADRALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIE 300
              +  + AD AL  L VD+ G D +D + L  I   F GGPVGI+ +AA + E +D IE
Sbjct: 237 AEAVTREIADEALTRLLVDNMGLDQLDMRYLTMIAVNFGGGPVGIETIAAGLSEPRDAIE 296

Query: 301 DVLEPFLIQQGYLQRTPRGRIATDRAYLHFGIE 333
           D++EP++IQQG++QRTPRGRI T  A+ H G++
Sbjct: 297 DIIEPYMIQQGFIQRTPRGRILTATAWKHLGLQ 329