Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., ATPase, AAA family protein from Agrobacterium fabrum C58

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 9/145 (6%)

Query: 4   ADRLIAP-ISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLI 62
           +D L AP +     +   +   +RPK L++  GQ H+  +  +  +   +   +L  ++ 
Sbjct: 2   SDDLFAPQVPVEVANRRPLADRLRPKTLSEVSGQPHLTGEEGVLRR--MIDSGSLGSMIF 59

Query: 63  FGPPGLGKTTLANIVANEMGVNIRTTSG-----PVLEKAGDLAALLTNLEENDVLFIDEI 117
           +GPPG GKTT+A +++ E G+     S        L+K  + A          +LF+DEI
Sbjct: 60  WGPPGTGKTTVARLLSGEAGLAFEQISAIFSGVADLKKVFEAARTRRMNGRQTLLFVDEI 119

Query: 118 HRLSPMVEEVLYPAMEDYQLDIMIG 142
           HR +   ++   P MED  + I++G
Sbjct: 120 HRFNRAQQDSFLPVMEDGTI-ILVG 143