Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 525 a.a., Cytochrome bd-I ubiquinol oxidase subunit 1 from Xanthobacter sp. DMC5

 Score =  602 bits (1551), Expect = e-176
 Identities = 290/505 (57%), Positives = 377/505 (74%), Gaps = 4/505 (0%)

Query: 14  MIDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFG 73
           ++D VDLSRLQFA+TA+YHFLFVPLTLG++ LLAIME++YVMT + I++ MTKFWG LFG
Sbjct: 2   ILDTVDLSRLQFAVTALYHFLFVPLTLGLSVLLAIMETVYVMTGRPIWRQMTKFWGTLFG 61

Query: 74  INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDR 133
           INF LGVATG+ MEFQFG NWSYYSHYVGDIFGAPLAIE L+AFFLE+TFVGLFFFGWDR
Sbjct: 62  INFVLGVATGIVMEFQFGMNWSYYSHYVGDIFGAPLAIEGLMAFFLEATFVGLFFFGWDR 121

Query: 134 LSKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVA 193
           LSK  HLV T+ VA+GSN SALWIL+ANGWMQNP G+ FN +TMRME+  F  V+ NPVA
Sbjct: 122 LSKVGHLVTTYAVAMGSNLSALWILIANGWMQNPTGAAFNPQTMRMEVSDFYAVLFNPVA 181

Query: 194 QVKFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDE 253
           Q KFVHTV+AGY T + F+LG+SA+YLLKGR +  A+RS  +AASFG+A+ LSV+VLGDE
Sbjct: 182 QAKFVHTVSAGYVTASFFVLGVSAWYLLKGRHIDLAKRSMTVAASFGLAASLSVVVLGDE 241

Query: 254 SGYELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSL 313
           SGY  GE Q++KLAAIE+ W TEPAPA FT+ G+P+Q    T +A+++P+ LG+IATR+L
Sbjct: 242 SGYLDGEHQKMKLAAIEAMWETEPAPAGFTIVGLPDQAARETRFAVRVPWVLGLIATRTL 301

Query: 314 DEQVVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKT----PENMAAFDEVKHDLGYGLL 369
             Q+ G+ +L      RI++GI A+D L+++RA   +    P    AF++   +LGY LL
Sbjct: 302 TTQIPGIEELVGHAETRIKSGIVAFDALQQIRAAGSSAAIAPAVKQAFEDNGGNLGYALL 361

Query: 370 LKRYTDKVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKI 429
           LKRY D    AT  ++  AA D++P V  LFWSFR+MV  GF  +      F  + R+++
Sbjct: 362 LKRYVDDPRKATAAEVNQAAWDTVPNVPTLFWSFRVMVGLGFFFIAFTAFVFYLSARRRL 421

Query: 430 EQKKWVLKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSML 489
           ++ + +L  A+ +IPLPWIA E GW VAE GRQPW +  +LP   A S+L AG ++ ++ 
Sbjct: 422 DRSRTLLWIAVLAIPLPWIAAELGWVVAEVGRQPWIIEGVLPTAAAVSSLGAGTVLATLA 481

Query: 490 AILALYTIFLIAEVYLMVKFTRKGP 514
              A+YT+ ++ E+ LM +  RKGP
Sbjct: 482 GFAAIYTVLIVVEMTLMFRAIRKGP 506