Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

 Score =  217 bits (553), Expect = 6e-61
 Identities = 115/314 (36%), Positives = 174/314 (55%), Gaps = 3/314 (0%)

Query: 14  MIDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFG 73
           M+D + LSR+QFA    +H LF  +T+ + ++L   +  Y+ T    + D+  FW K+F 
Sbjct: 1   MLDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFA 60

Query: 74  INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDR 133
           + FALGV +G+TM FQFGTNW  +   VG++ G  L  E + AFF+E+TF+G+  FG  R
Sbjct: 61  LTFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGR 120

Query: 134 LSKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVA 193
           + +  H + T LVA+G++ SA WILV N WM  P G E       + + S+ +V+ NP  
Sbjct: 121 VPEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVIDGV--VHVTSWKEVIFNPSM 178

Query: 194 QVKFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDE 253
             +  HT+ A   T +  I GISAY +L+      A+    +A S    ++   I++GD 
Sbjct: 179 PYRLAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDL 238

Query: 254 SGYELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSL 313
            G    E Q  K+AA+E  W TE   A   LF +PN+E    D+A+ IP    +I T  +
Sbjct: 239 HGLNTLEHQPAKIAAMEGVWQTERG-APLLLFALPNEETRSNDFALGIPNLASLILTHDM 297

Query: 314 DEQVVGLRDLRDEH 327
           + ++VGL     +H
Sbjct: 298 NGEIVGLDAFAPDH 311



 Score = 71.2 bits (173), Expect = 7e-17
 Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 12/134 (8%)

Query: 394 PTVWPLFWSFRIMVACGFIMLVV--FGAAFIQTCRQKIEQKKWVLKAALFSIPLPWIAVE 451
           P V PLF+ FR+MV  G +ML+V  FGA  +   +   +   + L    FS    W+A  
Sbjct: 312 PPVAPLFFGFRVMVGVGVLMLLVSWFGAWRVWRNKPLPKPYMYALIGMTFS---GWVATI 368

Query: 452 TGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLAILALYTIFLIAEVYLMVKFTR 511
            GW+V E GRQPW V  +L    A + +++  +  S+   L  Y + L+A V+ +    R
Sbjct: 369 AGWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYLITYVVLLVAYVHTLFYLAR 428

Query: 512 K-------GPSSLK 518
           K        PSS K
Sbjct: 429 KTGHAPQVSPSSTK 442