Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 526 a.a., Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) from Sphingobium sp. HT1-2

 Score =  601 bits (1550), Expect = e-176
 Identities = 294/498 (59%), Positives = 371/498 (74%), Gaps = 1/498 (0%)

Query: 17  VVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGINF 76
           VV+LSRLQFALTA+YHFLFVPLTLG++F+L IMES+YVMTD+ I++D+T+FWGKLFGINF
Sbjct: 6   VVELSRLQFALTALYHFLFVPLTLGLSFMLVIMESVYVMTDRPIWRDITRFWGKLFGINF 65

Query: 77  ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDRLSK 136
            LGVATGLTMEF+FGTNW+YYSHYVGDIFGAPLAIE L+AFFLE+TFVGL FFGWDRLSK
Sbjct: 66  VLGVATGLTMEFEFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLEATFVGLMFFGWDRLSK 125

Query: 137 RQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVAQVK 196
           R HL+ T++VALGSN SALWILVANGWMQ+P G+ FN +TMRME+  F  V+ NPVAQ K
Sbjct: 126 RGHLLTTFMVALGSNLSALWILVANGWMQHPTGATFNPQTMRMEVTDFMAVIFNPVAQAK 185

Query: 197 FVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDESGY 256
           FVHTV+AGY   ++F+LG+SA+YLLKG+ +A A+RSF +AA+FG+A+ LSV+VLGDESGY
Sbjct: 186 FVHTVSAGYVCASVFVLGVSAFYLLKGKHIAIAKRSFTVAAAFGLAASLSVVVLGDESGY 245

Query: 257 ELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSLDEQ 316
            L E Q++KLAAIE  W TEPAPA  TLFG+P+     T + IK+P+ LG+I+TRSL  +
Sbjct: 246 ALTENQKMKLAAIEGMWQTEPAPAGLTLFGLPSNSGRETTHEIKVPYVLGLISTRSLTGE 305

Query: 317 VVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKTPENMAAFDEVKHDLGYGLLLKRYTDK 376
           V G+  L D    RI  GI AYD +E L+          AF+  K DLGY LLLKR+   
Sbjct: 306 VTGINQLVDTAKVRIAAGIIAYDAVETLKVDRNDLVAREAFERNKADLGYALLLKRFIAD 365

Query: 377 VTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKIEQKKWVL 436
              A    I+ AA  ++P V  +FW FRIM   GF  + +F  AF  +  ++ +  +W L
Sbjct: 366 PRQADAATIEKAAWSTVPNVPAIFWMFRIMAGLGFAFIALFAIAFAFSSMRRFD-ARWFL 424

Query: 437 KAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLAILALYT 496
           K ALF +P+PWIA+E GW VAE GRQPWAV  +LP  +AAS+L+  ++ T+++    LY 
Sbjct: 425 KLALFMMPMPWIAIEVGWAVAEIGRQPWAVDGVLPTFLAASSLTVPQLWTTIIGFTLLYG 484

Query: 497 IFLIAEVYLMVKFTRKGP 514
           I  + EV LM+    KGP
Sbjct: 485 ILAVIEVKLMLATIAKGP 502