Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., Ubiquinol oxidase subunit I, cyanide insensitive from Pseudomonas putida KT2440

 Score =  245 bits (625), Expect = 3e-69
 Identities = 152/503 (30%), Positives = 236/503 (46%), Gaps = 68/503 (13%)

Query: 15  IDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGI 74
           I+ ++L+R+QFA T  +H LF  +T+G+A  LA++E L++ T  Q+Y+D+  FW K+F +
Sbjct: 4   IEALELARMQFAFTVSFHILFPAITIGLASYLAVLEGLWLRTHNQVYRDLYHFWSKIFAV 63

Query: 75  NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDRL 134
           NF +GV +GL M +QFGTNWS +S + G + G  L  E L AFFLE+ F+G+  FGW+R+
Sbjct: 64  NFGMGVVSGLVMAYQFGTNWSRFSDFAGAVTGPLLTYEVLTAFFLEAGFLGVMLFGWNRV 123

Query: 135 SKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVAQ 194
            +  H   T +VALG+  S  WIL +N WMQ P G E      R+  V +  VV NP   
Sbjct: 124 GRGLHFFSTVMVALGTLVSTFWILASNSWMQTPQGHE--IIDGRVVPVDWFAVVFNPSFP 181

Query: 195 VKFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDES 254
            + +H   A + + A F+   +A++LL+GRD    R+  ++A    +       V+GD  
Sbjct: 182 YRLMHMATAAFVSTAFFVGASAAWHLLRGRDNPAVRKMLSMAMWMALIVAPIQAVIGDFH 241

Query: 255 GYELGEVQRVKLAAIESEWHTEPA-PAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSL 313
           G    + Q VK+AAIE  W   P  P    LFGIP+ E   T + I+IP    +I T SL
Sbjct: 242 GLNTLKHQPVKIAAIEGHWENVPGEPTPLILFGIPDMEAETTRFKIEIPALGSLILTHSL 301

Query: 314 DEQVVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKTPENMAAFDEVKHDLGYGLLLKRY 373
           D+QV  +++                         E  P +   F   +  +G G L    
Sbjct: 302 DKQVPAMKEF----------------------PPEDRPNSTIVFWSFRIMVGLGFL---- 335

Query: 374 TDKVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKIEQKK 433
                                           M+  G   L +     + + R  +    
Sbjct: 336 --------------------------------MIFVGLWSLWLRKRGTLYSSRPFLHVAL 363

Query: 434 WVLKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLAILA 493
           W+  + L ++   W       F  E GRQPW V  ++      S  S  ++  +++A + 
Sbjct: 364 WMGPSGLVALLAGW-------FTTEIGRQPWVVYGLMRTADGVSNHSYAQLGFTLVAFVV 416

Query: 494 LYTIFLIAEVYLMVKFTRKGPSS 516
           +Y       +  M++  RKGP +
Sbjct: 417 VYFALFGTGLGYMMRLVRKGPQT 439