Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  654 bits (1687), Expect = 0.0
 Identities = 318/514 (61%), Positives = 400/514 (77%)

Query: 14  MIDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFG 73
           M DV+DLSR QFALTA+YHFLFVPLTLG+ FLLA+ME++YV+T K +Y+DMT+FWGKLFG
Sbjct: 1   MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAVMETIYVVTGKTVYRDMTRFWGKLFG 60

Query: 74  INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDR 133
           INFALGVATGLTMEFQFGTNWS YS+YVGDIFGAPLA+EAL+AFFLESTFVGLFFFGW R
Sbjct: 61  INFALGVATGLTMEFQFGTNWSLYSNYVGDIFGAPLAMEALLAFFLESTFVGLFFFGWQR 120

Query: 134 LSKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVA 193
           L+K QHL+VTWLVA GSN SALWIL ANGWMQ P G+ FN +T+RMEM SF+D+V NPV+
Sbjct: 121 LNKYQHLLVTWLVAFGSNISALWILNANGWMQYPTGAHFNIDTLRMEMSSFSDLVFNPVS 180

Query: 194 QVKFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDE 253
           QVKFVHTV +GY TGAMFI+ ISA+YLL+GR+   A RSFAI + FG  ++L  + LGD 
Sbjct: 181 QVKFVHTVMSGYVTGAMFIMSISAWYLLRGREREVALRSFAIGSVFGTLAILGTLQLGDS 240

Query: 254 SGYELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSL 313
           S YE+ ++Q VKLAA+E EW TEPAPA F L   P QE+ R  +A+KIP  LGI+AT SL
Sbjct: 241 SAYEVAQIQPVKLAAMEGEWQTEPAPAPFHLIAWPQQEQERNAFAVKIPALLGILATHSL 300

Query: 314 DEQVVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKTPENMAAFDEVKHDLGYGLLLKRY 373
           D  V GL++L D+ + R++ G  A+ L++ +  G ++P+ + AF  V+ DLGYG+LL +Y
Sbjct: 301 DTPVPGLKNLMDDALPRLKRGREAWLLMKEIAQGNRSPQVLNAFHAVEGDLGYGILLAKY 360

Query: 374 TDKVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKIEQKK 433
              +   T EQ +AA   +IP V P+FWSFRIMV CG ++LVV   A IQT R +I+Q +
Sbjct: 361 APDMNHVTPEQYRAAQRGAIPQVAPVFWSFRIMVGCGSLLLVVMLIALIQTLRMRIDQHR 420

Query: 434 WVLKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLAILA 493
           WVL+  L+S+PLPWIA+E GWF+ E+GRQPWA+ +ILP   A SAL+ G++  SM  IL 
Sbjct: 421 WVLRMTLWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTWYAHSALTPGQLAFSMGLILG 480

Query: 494 LYTIFLIAEVYLMVKFTRKGPSSLKTGRYHFEQG 527
           LYT+FLIAEVYLM K+ R GPS+++  +   +QG
Sbjct: 481 LYTLFLIAEVYLMQKYARLGPSAMQHQQQAQQQG 514