Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., cytochrome bd-II oxidase, subunit I (NCBI) from Escherichia coli BW25113

 Score =  650 bits (1676), Expect = 0.0
 Identities = 316/514 (61%), Positives = 400/514 (77%)

Query: 14  MIDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFG 73
           M DV+DLSR QFALTA+YHFLFVPLTLG+ FLLAIME++YV+T K IY+DMT+FWGKLFG
Sbjct: 1   MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60

Query: 74  INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDR 133
           INFALGVATGLTMEFQFGTNWS+YS+YVGDIFGAPLA+EAL+AFFLESTFVGLFFFGW R
Sbjct: 61  INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120

Query: 134 LSKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVA 193
           L+K QHL+VTWLVA GSN SALWIL ANGWMQ P G+ F+ +T+RMEM SF+++V NPV+
Sbjct: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180

Query: 194 QVKFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDE 253
           QVKFVHTV AGY TGAMFI+ ISA+YLL+GR+   A RSFAI + FG  +++  + LGD 
Sbjct: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240

Query: 254 SGYELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSL 313
           S YE+ +VQ VKLAA+E EW TEPAPA F +   P Q++ R  +A+KIP  LGI+AT SL
Sbjct: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300

Query: 314 DEQVVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKTPENMAAFDEVKHDLGYGLLLKRY 373
           D+ V GL++L  E   R++ G  A+ L++ +  G + P  + AF  ++ DLGYG+LL RY
Sbjct: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360

Query: 374 TDKVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKIEQKK 433
              +   T  Q QAA   +IP V P+FWSFRIMV CG ++L+V   A +QT R KI+Q +
Sbjct: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR 420

Query: 434 WVLKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLAILA 493
           WVLK AL+S+PLPWIA+E GWF+ E+GRQPWA+ +ILP   A SAL+ G++  S++ I+ 
Sbjct: 421 WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG 480

Query: 494 LYTIFLIAEVYLMVKFTRKGPSSLKTGRYHFEQG 527
           LYT+FLIAEVYLM K+ R GPS++++ +   +QG
Sbjct: 481 LYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514