Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 522 a.a., cytochrome d terminal oxidase, polypeptide subunit I (VIMSS) from Escherichia coli BW25113

 Score =  800 bits (2065), Expect = 0.0
 Identities = 388/519 (74%), Positives = 451/519 (86%)

Query: 14  MIDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFG 73
           M+D+V+LSRLQFALTAMYHFLFVPLTLGMAFLLAIME++YV++ KQIYKDMTKFWGKLFG
Sbjct: 1   MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60

Query: 74  INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDR 133
           INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIE L+AFFLESTFVGLFFFGWDR
Sbjct: 61  INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120

Query: 134 LSKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVA 193
           L K QH+ VTWLVALGSN SALWILVANGWMQNP+ S+FNFETMRMEMVSF+++VLNPVA
Sbjct: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180

Query: 194 QVKFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDE 253
           QVKFVHTVA+GY TGAMFILGISA+Y+LKGRD AFA+RSFAIAASFGMA+VLSVIVLGDE
Sbjct: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240

Query: 254 SGYELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSL 313
           SGYE+G+VQ+ KLAAIE+EW T+PAPAAFTLFGIP+QEE    +AI+IP+ALGIIATRS+
Sbjct: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300

Query: 314 DEQVVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKTPENMAAFDEVKHDLGYGLLLKRY 373
           D  V+GL++L  +H ERIR G+ AY LLE+LR+G         F+ +K DLGYGLLLKRY
Sbjct: 301 DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY 360

Query: 374 TDKVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKIEQKK 433
           T  V DATE QIQ A  DSIP V PL+++FRIMVACGF++L +   +F    R +I +KK
Sbjct: 361 TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK 420

Query: 434 WVLKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLAILA 493
           W+L+AAL+ IPLPWIAVE GWFVAEYGRQPWA+GE+LP  VA S+L+AG++I SM+ I  
Sbjct: 421 WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG 480

Query: 494 LYTIFLIAEVYLMVKFTRKGPSSLKTGRYHFEQGAESVQ 532
           LYT+FL+AE++LM KF R GPSSLKTGRYHFEQ + + Q
Sbjct: 481 LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQ 519