Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein (EC 1.10.3.10) from Kangiella aquimarina DSM 16071

 Score =  223 bits (569), Expect = 1e-62
 Identities = 154/506 (30%), Positives = 231/506 (45%), Gaps = 71/506 (14%)

Query: 14  MIDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFG 73
           ++D V L+R+QFA T  +H +F  L++G+A  L ++E L++ T K +Y    K+W K+F 
Sbjct: 3   LLDAVLLARIQFAFTITFHIIFPGLSIGLAAYLTVLEGLWLKTGKPVYLATFKYWLKIFS 62

Query: 74  INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDR 133
           I F +GV +G+ M +QFGTNWS +S   G + G  +  E L AFFLE+ F+G+  FG ++
Sbjct: 63  IIFGMGVVSGVVMSYQFGTNWSVFSDKTGPVLGPLMGYEVLSAFFLEAGFLGVMLFGMNK 122

Query: 134 LSKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVA 193
           + K  H   T +V+LG+  SA WIL  N WMQ P G E N E  +  + ++ DV+ NP  
Sbjct: 123 VGKGLHFFATLMVSLGTLMSAFWILSVNSWMQTPAGYEIN-EAGQFVVANWFDVIFNPSF 181

Query: 194 QVKFVHTVAAGYTTGAMFILGISAYYLLKGRDVA----FARRSFAIAASFGMASVLSVIV 249
             +  H   A + + A  + G+ A++L K R        AR  F++A           +V
Sbjct: 182 PYRLAHMTTAAFLSTAFLVGGVGAWHLYKARKQGERNEVARLMFSMAMWMAALVAPVQLV 241

Query: 250 LGDESGYELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIA 309
           +GD  G    E Q  K+AA+E  + T+   A   LFG+PN E    DYAIKIP A   I 
Sbjct: 242 IGDLHGLNTLEHQPAKVAAMEGNYQTQKG-APLYLFGMPNSETETVDYAIKIPKAASFIL 300

Query: 310 TRSLDEQVVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKTPENMAAFDEVKHDLGYGLL 369
           T   D ++VGL     +    +    +++ ++  +  G      M A       +G   L
Sbjct: 301 THDPDGKLVGLDQFPKDEWPNVPIVFWSFRIMVAIGMG------MIA-------IGLWSL 347

Query: 370 LKRYTDKVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKI 429
             R   K+ D                  PL     I+ A   I+  V G           
Sbjct: 348 YLRARKKLYDT-----------------PLLLRVAIVFAPSGIIATVAG----------- 379

Query: 430 EQKKWVLKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSML 489
                            W   E        GRQP+ V  +L    +AS L A  +  S+L
Sbjct: 380 -----------------WFVTEV-------GRQPYTVYGLLKTVDSASPLDAPAVAASLL 415

Query: 490 AILALYTIFLIAEVYLMVKFTRKGPS 515
           A + +Y I     V+  ++   K PS
Sbjct: 416 AFIIVYLIVFGTGVWYTMRLMSKRPS 441