Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., Cytochrome bd-type quinol oxidase, subunit 1 from Enterobacter asburiae PDN3

 Score =  243 bits (619), Expect = 2e-68
 Identities = 152/506 (30%), Positives = 230/506 (45%), Gaps = 68/506 (13%)

Query: 15  IDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGI 74
           +D   L+R+QFA T  +H +F  +T+G+A  LA++E L++ T   +++ +  FW K+F +
Sbjct: 4   LDAFHLARIQFAFTVSFHIIFPAITIGLASYLAVLEGLWLKTKNPVWRSLYHFWSKIFAV 63

Query: 75  NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDRL 134
           NF +GV +GL M +QFGTNWS +S + G I G  L  E L AFFLE+ F+G+  FGW+++
Sbjct: 64  NFGMGVVSGLVMAYQFGTNWSGFSQFAGSITGPLLTYEVLTAFFLEAGFLGVMLFGWNKV 123

Query: 135 SKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVAQ 194
               H   T +VALG+  S  WIL +N WMQ P G  +     ++  V +  VV NP   
Sbjct: 124 GPGLHFFATCMVALGTIISTFWILSSNSWMQTPQG--YEIVNGQVVPVDWFAVVFNPSFP 181

Query: 195 VKFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDES 254
            + +H   A + + A+F+   +A++LL+G +    R  F++A    +       ++GD  
Sbjct: 182 YRLLHMSIAAFLSSALFVGASAAWHLLRGNNTPAIRAMFSMALWMTLIVAPIQAMVGDMH 241

Query: 255 GYELGEVQRVKLAAIESEWHTEPA-PAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSL 313
           G    + Q  K+AAIE  W   P  P    LFG P+ E+ RT + ++IP    +I T SL
Sbjct: 242 GLNTLKHQPAKIAAIEGHWENPPGEPTPLLLFGWPDMEQERTRFGLEIPALGSLILTHSL 301

Query: 314 DEQVVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKTPENMAAFDEVKHDLGYGLLLKRY 373
           D+QV  L++   E         +++ +             MA    +   LG   L  RY
Sbjct: 302 DKQVPALKEFAKEDRPNSTIVFWSFRI-------------MAGLGMLMLLLGVTALWLRY 348

Query: 374 TDKVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKIEQKK 433
             +V  +                 P  W   +M   G I                     
Sbjct: 349 KKRVYSSR----------------PFLWFALLMGPTGLI--------------------- 371

Query: 434 WVLKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLAILA 493
                          A+  GW   E GRQPW V  +     A SA     +  S+LA   
Sbjct: 372 ---------------AILAGWITTEVGRQPWVVYGLQRTKDAVSAHGDLHMSVSLLAFFV 416

Query: 494 LYTIFLIAEVYLMVKFTRKGPSSLKT 519
           +YT         MV+  RKGP   +T
Sbjct: 417 VYTSVFGVGYSYMVRLIRKGPQPHET 442