Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., cytochrome ubiquinol oxidase subunit I from Dickeya dadantii 3937

 Score =  238 bits (607), Expect = 4e-67
 Identities = 152/504 (30%), Positives = 234/504 (46%), Gaps = 70/504 (13%)

Query: 15  IDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGI 74
           +D   L+R+QFA T  +H +F  +T+G+A  LA++E L++ T  + Y+D+  FW K+F +
Sbjct: 4   LDAFHLARIQFAFTVSFHIIFPAITIGLASFLAVLEGLWLKTKNRDYRDLYHFWSKIFAV 63

Query: 75  NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDRL 134
           NF +GV +GL M +QFGTNWS +S + G I G  L  E L AFFLE+ F+G+  FGW R+
Sbjct: 64  NFGMGVVSGLVMAYQFGTNWSGFSQFAGSITGPLLTYEVLTAFFLEAGFLGVMLFGWQRV 123

Query: 135 SKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVAQ 194
               H   T +VALG+  S  WIL +N WMQ P G E +     +  V +  V+ NP   
Sbjct: 124 GPGLHFFATCMVALGTIISTFWILASNSWMQTPQGHEIHNGV--VVPVDWLAVIFNPSFP 181

Query: 195 VKFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDES 254
            + +H   A +   A F+   +A++LL+  D    R+  ++A    +       +LGD  
Sbjct: 182 YRLMHMATAAFLASAFFVGASAAWHLLRNNDTPAIRKMLSMALWMALIVAPVQAMLGDMH 241

Query: 255 GYELGEVQRVKLAAIESEWHTEPA-PAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSL 313
           G    + Q  K+AAIE  W   P  P    LFG P+ E+  T YA++IP+   +I T  L
Sbjct: 242 GLNTLKYQPAKIAAIEGHWDNPPGEPTPLILFGWPDMEQETTRYALEIPYLGSLILTHRL 301

Query: 314 DEQVVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKTPENMAAFDEVKHDLGYGLLLKRY 373
           D+QV  L+                          E  P +   F   +  +G G+L+   
Sbjct: 302 DQQVPALKSF----------------------PKEDRPNSTVVFWSFRIMVGLGMLMILL 339

Query: 374 TDKVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKIEQKK 433
                              +  +W L W  R+  +  F+   +                 
Sbjct: 340 ------------------GVIGLW-LRWRRRLYQSRPFLWFTLL---------------- 364

Query: 434 WVLKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLAILA 493
            +  + L +I   W   E        GRQPW V  +     A SA    ++  S+L  +A
Sbjct: 365 -MGPSGLIAILAGWFTTEV-------GRQPWVVYGLQRTRDAVSAHGDLQMSISLLLFIA 416

Query: 494 LY-TIFLIAEVYLMVKFTRKGPSS 516
           +Y ++F +  VYL V+  +KGP +
Sbjct: 417 VYLSVFGVGYVYL-VRLIKKGPQA 439