Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., Cytochrome bd-type quinol oxidase, subunit 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  160 bits (405), Expect = 9e-44
 Identities = 92/315 (29%), Positives = 164/315 (52%), Gaps = 7/315 (2%)

Query: 15  IDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGI 74
           +D +  +R Q AL+  +H +F  + + M FL+AI    ++ + K+ YK +TK W K   I
Sbjct: 1   MDDLMAARSQMALSLGFHIIFACIGMIMPFLMAISHYKFLRSGKEKYKVLTKAWSKGVAI 60

Query: 75  NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDRL 134
            F  G  +G  + F+ G  W  +  + G IFG P ++E   AFF+E+  +G F +GW++ 
Sbjct: 61  FFVTGAVSGTMLSFELGLLWPEFMKHAGPIFGMPFSLEG-TAFFIEAIALGFFLYGWEKF 119

Query: 135 SKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEF-NFETMRMEMVSFADVVLNPVA 193
           +   H     +V +    S + ++ AN WM +P G ++ N E + ++ ++    + N   
Sbjct: 120 NPWFHWFTGVVVGISGLASGILVVAANAWMNSPAGFDYVNGEYLNIDPMA---AMFNDAW 176

Query: 194 QVKFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDE 253
             + +H + A +      + GI A+ L KG++    + +  I+ + G  + +   + GD 
Sbjct: 177 FTQALHMILAAFVATCFAVAGIHAWMLTKGKNSPIHKAALKISLTIGAVAAILQPISGDL 236

Query: 254 SGYELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSL 313
           S  ++   Q  KLAA+E+ + TE + A   + GIP++E    +YAIK+P AL  +A    
Sbjct: 237 SAKDVAVRQPAKLAAMEAHFKTETS-APLIIGGIPDEENQTVNYAIKLPGALSFLAHGDF 295

Query: 314 DEQVVGLRDL-RDEH 327
           +  V GL  + +DEH
Sbjct: 296 NASVTGLDQIPKDEH 310



 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 14/117 (11%)

Query: 391 DSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQK--IEQKKWVLKAALFSIPLPWI 448
           D  P V    ++F+IMV CG ++++      +   + K  I  K+++   AL + PL +I
Sbjct: 308 DEHPPVTVTHFAFQIMVGCGMLLMLTGIVWLLGLWKNKRFIYSKRFLGLIALLT-PLGFI 366

Query: 449 AVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLAILALYTIFLIAEVYL 505
           AVE GWFV E GRQPW +  I+            E +T M  I  +Y+  L A +YL
Sbjct: 367 AVEAGWFVTEVGRQPWILYGIMKTK---------EAVTPMPGI--VYSFILYAVIYL 412