Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., Cytochrome bd-II ubiquinol oxidase subunit 1 from Azospirillum sp. SherDot2

 Score =  247 bits (631), Expect = 6e-70
 Identities = 154/502 (30%), Positives = 237/502 (47%), Gaps = 69/502 (13%)

Query: 15  IDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGI 74
           +D + LSR+QFA T  +H LF   T+G+A  +A++E+L+V T K IY+ +++FW ++F +
Sbjct: 3   LDPLILSRIQFAFTISFHILFPSFTVGLACWIALLEALWVGTGKGIYRSLSEFWTRIFAL 62

Query: 75  NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDRL 134
           +F LGV +G+ M +QFGTNWS +S  VG++ G  +  E + AFFLE+ F+G+  FG DR+
Sbjct: 63  SFGLGVVSGIVMSYQFGTNWSRWSDTVGNVLGPLIQYEVVTAFFLEAAFLGILLFGRDRV 122

Query: 135 SKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVAQ 194
            +  HL+   LVALG+  S+ WIL AN WM  P G  F  +  R  +  +  VV NP   
Sbjct: 123 PRGIHLMAACLVALGTLLSSFWILSANSWMHTPAG--FEIKDGRYFVTDWWQVVFNPSFP 180

Query: 195 VKFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDES 254
            +  H V A + T +  + GISA+YLLK R    AR    +A +         I LGDE 
Sbjct: 181 YRLAHMVTAMFLTTSFVVAGISAFYLLKRRHFDHARLGLGMALALITVLAPLQIFLGDEH 240

Query: 255 GYELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSLD 314
           G    E Q  K+AA+E  W   P  A   LF IP+ E       I IP    +I T   +
Sbjct: 241 GLNTLEHQPAKIAAMEGNWEGGPR-APLVLFAIPDVETETNHLEIGIPALSSLILTHDFN 299

Query: 315 EQVVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKTPENMAAFDEVKHDLGYGLLLKRYT 374
             V GL+                          ++ P+    F   +  +G G L+    
Sbjct: 300 GSVPGLKQF----------------------PADERPDPRIVFWTFRLMVGIGFLM---- 333

Query: 375 DKVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKIEQKKW 434
                                         + VA   ++L V G         ++    W
Sbjct: 334 ------------------------------LTVAAVHLVLRVRG---------RLYSSDW 354

Query: 435 VLKAALFSIPLPWIAVETGWFVAEYGRQPWAV-GEILPVNVAASALSAGEIITSMLAILA 493
             +  +  +P+ ++A+  GWF  E GRQPW V G +   +    +L+A   + S+++ + 
Sbjct: 355 FNRILVGCMPIGFVAILAGWFTTEIGRQPWVVYGHLRTADAVTPSLTAEAALVSLVSFVV 414

Query: 494 LYTIFLIAEVYLMVKFTRKGPS 515
            YT+   A  Y +++    GP+
Sbjct: 415 AYTLIYGAGTYYLIRLLHAGPT 436