Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., Cytochrome bd-I ubiquinol oxidase subunit 2 from Xanthobacter sp. DMC5

 Score =  130 bits (327), Expect = 5e-35
 Identities = 97/346 (28%), Positives = 157/346 (45%), Gaps = 40/346 (11%)

Query: 22  FAITDGFDMGVGALVPIIGKNDNERRVMINSIAPHWDGNQVWLITAGGALFAAWPLVYAT 81
           + + DG D+GVG L  +    D +R VM+ SI P WDGN+ WL+  G  LFAA+P  Y  
Sbjct: 25  YVLADGLDLGVGILF-LAAPRDADRDVMMASIEPVWDGNETWLVMGGTLLFAAFPAGYYI 83

Query: 82  SFSGFYLAMIVTLAALWLRPVGLDYRSKIESTKWRNNWDLAISASGFIPPVIFGVAFGNL 141
               FYL ++  L AL  R V   +R  +++T++R  WD A  A   +     G+  G L
Sbjct: 84  LLPAFYLPIMFMLFALIFRGVAFGFR--LQATRFRPVWDAAFFAGSLLATFCQGLILGGL 141

Query: 142 LQGVPFQLSDFLMPTYHGSFFGLLNPFALLCGLVSLFMTLLQGSAWLQMKTTSHVHQRAR 201
           + GVP +   F      G  F  L+   ++CG+  +    L G+ WL  K         R
Sbjct: 142 IDGVPVENGMFA-----GGAFSFLSVLGIMCGVGLVGGYALIGAGWLIWKAQGPTQVFGR 196

Query: 202 NVAQLTGLLTAVCFVAAGFWVQHIDGYMIVGAIDGNAASNPLNKEVIREAGAWLHNFEQV 261
            +A+   +LT+   +    W               +A S P        A  W   F   
Sbjct: 197 EIARAALILTSAMMLLVSLW---------------SAWSVP------EVAARW---FALP 232

Query: 262 PVLWLAPALGVLMPLLSVLASRLDKGGLA--FLTSSLGNAGVIFTAGFAMFPFVMPSSLN 319
            +LWLAP   + + ++  +   +  G  A  F+ S +  A  +F    +M+P+V+P    
Sbjct: 233 NLLWLAPVPLLTLAVIVGIWWAIWNGREAQTFVLSLVLFALGLFGLVVSMWPYVVP---- 288

Query: 320 PAHSLTMWDATSSKLTLELMTVVAVVMVPIILGYTIWSYYKMFGRL 365
               +T+WD  S   +L  + V  +V++P++L Y   +Y+   G++
Sbjct: 289 --RQVTVWDGLSDPRSLAFLGVGVMVIIPVVLAYQAHAYWIFRGKV 332