Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., Ubiquinol oxidase subunit II, cyanide insensitive from Pseudomonas putida KT2440

 Score =  156 bits (395), Expect = 7e-43
 Identities = 110/362 (30%), Positives = 171/362 (47%), Gaps = 41/362 (11%)

Query: 7   LRLIWWVLIGVLLVGFAITDGFDMGVGALVPIIGKNDNERRVMINSIAPHWDGNQVWLIT 66
           L LIW V+I   ++ + + DGFD+G+G L P + K + +R VM+N++AP WDGN+ WL+ 
Sbjct: 5   LPLIWAVIIIFGVMMYVVMDGFDLGIGMLFPFV-KGEQDRDVMMNTVAPVWDGNETWLVL 63

Query: 67  AGGALFAAWPLVYATSFSGFYLAMIVTLAALWLRPVGLDYRSKIESTKWRNNWDLAISAS 126
            G  LF A+P+ YA      YL +I+ L  L  R V  ++R K ++ K R+ WD A    
Sbjct: 64  GGAGLFGAFPMAYAVVLEALYLPLILMLIGLIFRGVAFEFRFKAKADK-RHIWDKAFIWG 122

Query: 127 GFIPPVIFGVAFGNLLQGVPFQLSDFLMPTYHGSFFGLLNPFALLCGLVSLFMTLLQGSA 186
             I     GVA G  L+G  F++ D     + G     L PF+L CGL  +    L G  
Sbjct: 123 SLIATFFQGVALGAFLEG--FKVVD---RHFAGGTLDWLTPFSLFCGLGLIVAYTLLGCT 177

Query: 187 WLQMKTTSHVHQRARNVAQLTGLLTAVCFVAAGFWVQHIDGYMIVGAIDGNAASNPLNKE 246
           WL MKT   + Q+  ++A+   L+  V       W                    P+   
Sbjct: 178 WLIMKTEGPLQQKMHDMARPLALVLLVVIGIVSLW-------------------TPIAYP 218

Query: 247 VIREAGAWLHN---FEQVPVLWLAPALGVLMPLLSVLASRLDKGGLAFLTSSLGNAGVIF 303
            I +    + N   F  VP+L L    G+L  +     +      L  +   LG +G+  
Sbjct: 219 QIADRWFSMPNLIWFMPVPLLVLVTFYGLLKAV--ARNAHYTPFLLTLVLIFLGYSGL-- 274

Query: 304 TAGFAMFPFVMPSSLNPAHSLTMWDATSSKLTLELMTVVAVVMVPIILGYTIWSYYKMFG 363
             G +++P ++P       S+++WDA +   +   M V  + ++P IL YT WSYY   G
Sbjct: 275 --GISLWPNIIPP------SISIWDAAAPPQSQGFMLVGTLFILPFILMYTFWSYYVFRG 326

Query: 364 RL 365
           ++
Sbjct: 327 KV 328