Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  108 bits (271), Expect = 2e-28
 Identities = 91/363 (25%), Positives = 158/363 (43%), Gaps = 44/363 (12%)

Query: 5   EILRLIWWVLIGVLLVGFAITDGFDMGVGALVPIIGKNDNERRVMINSIAPHWDGNQVWL 64
           E+L LI+  ++G+ L+ + I DG+D+GVG L+P+  ++  ++  MI+SI P WD N+ WL
Sbjct: 8   EVLPLIFLAVMGLALLAYVILDGYDLGVGLLLPL-AESKEQKDTMISSIGPFWDANETWL 66

Query: 65  ITAGGALFAAWPLVYATSFSGFYLAMIVTLAALWLRPVGLDYRSKIESTKWRNNWDLAIS 124
           +   G L  A+P+ +       YL + V L  L LR V  D+R K   TK+   W+ A  
Sbjct: 67  VLGVGVLLVAFPMAHGLVLQALYLPVAVMLIGLILRGVAFDFRVK-APTKYVPFWNRAFF 125

Query: 125 ASGFIPPVIFGVAFGNLLQGVPFQLSDFLMPTYHGSFFGLLNPFALLCGLVSLFMTLLQG 184
               +     G   G+ + G            +   + GL   F+L   L      +L G
Sbjct: 126 VGSLLASASQGWMLGSYITG------------FDKGWLGL--SFSLGIALTLPAAYILLG 171

Query: 185 SAWLQMKTTSHVHQRARNVAQLTGLLTAVCFVAAGFWVQHIDGYMIVGAIDGNAASNPLN 244
           + WL MKT   +   A                    W   +   M V  +  +AA+  +N
Sbjct: 172 AGWLIMKTEGELQAHAVR------------------WAARVLWPMGVALVAISAATPLVN 213

Query: 245 KEVIREAGAWLHNFEQVPVLWLAPALGVLMPLLSVLASRLDKGG---LAFLTSSLGNAGV 301
             V+ +  +    F  +P+  L+ A+        V    + K G   + F  + L     
Sbjct: 214 PGVVAKWFSVPEVFGLMPIP-LSCAIAFFAVRWVVTHPNVVKAGYGWVVFAATVLIFVLA 272

Query: 302 IFTAGFAMFPFVMPSSLNPAHSLTMWDATSSKLTLELMTVVAVVMVPIILGYTIWSYYKM 361
            F   +++FP ++   +N      +W A  S  +L ++ +   + +P+I+ YTI+ Y   
Sbjct: 273 FFGLAYSIFPDIVIGRMN------VWQAAVSTGSLTVIFIGVAITLPVIIIYTIYMYRVF 326

Query: 362 FGR 364
           +G+
Sbjct: 327 WGK 329