Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  511 bits (1316), Expect = e-149
 Identities = 243/379 (64%), Positives = 295/379 (77%), Gaps = 1/379 (0%)

Query: 1   MFDYEILRLIWWVLIGVLLVGFAITDGFDMGVGALVPIIGKNDNERRVMINSIAPHWDGN 60
           M DYE+LR IWW+L+G+LL+GFA+TDGFDMGVG L   +G+ND ERR+MINSIAPHWDGN
Sbjct: 1   MIDYEVLRFIWWLLVGILLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGN 60

Query: 61  QVWLITAGGALFAAWPLVYATSFSGFYLAMIVTLAALWLRPVGLDYRSKIESTKWRNNWD 120
           QVWLITAGGALFAAWP+VYA +FSGFY+AMI+ LA+L+ RPVG DYRSKIE  +WRN WD
Sbjct: 61  QVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEDPRWRNMWD 120

Query: 121 LAISASGFIPPVIFGVAFGNLLQGVPFQLSDFLMPTYHGSFFGLLNPFALLCGLVSLFMT 180
             +    F+PP++ GVAFGNLLQGVPF + ++L   Y G+FF LLNPF LL G+VS+ M 
Sbjct: 121 WGVFIGSFVPPLVIGVAFGNLLQGVPFHVDEYLRLYYTGNFFQLLNPFGLLAGIVSVGMI 180

Query: 181 LLQGSAWLQMKTTSHVHQRARNVAQLTGLLTAVCFVAAGFWVQH-IDGYMIVGAIDGNAA 239
           + QG+ +LQM+T   +H RAR  +Q+  L+T VCF  AG WV + IDGY++  AID +AA
Sbjct: 181 ITQGATYLQMRTVGELHLRARATSQIAALVTLVCFALAGVWVMYGIDGYVVTSAIDHHAA 240

Query: 240 SNPLNKEVIREAGAWLHNFEQVPVLWLAPALGVLMPLLSVLASRLDKGGLAFLTSSLGNA 299
           SNPL KEV REAGAWL NF   P+LWL PALGV++PLL++L SR++KG  AFL SSL  A
Sbjct: 241 SNPLTKEVAREAGAWLVNFNNAPILWLVPALGVVLPLLTILTSRMEKGAWAFLFSSLTLA 300

Query: 300 GVIFTAGFAMFPFVMPSSLNPAHSLTMWDATSSKLTLELMTVVAVVMVPIILGYTIWSYY 359
            +I TAG AMFPFVMPSS     SLTMWDATSS++TL LMT VA V VPIIL YT W Y+
Sbjct: 301 CIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQMTLNLMTWVAAVFVPIILIYTSWCYW 360

Query: 360 KMFGRLDDKFIEDNKNSLY 378
           KMFGR+  + IE N +SLY
Sbjct: 361 KMFGRITKEHIESNTHSLY 379