Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  424 bits (1089), Expect = e-123
 Identities = 199/379 (52%), Positives = 273/379 (72%), Gaps = 2/379 (0%)

Query: 1   MFDYEILRLIWWVLIGVLLVGFAITDGFDMGVGALVPIIGKNDNERRVMINSIAPHWDGN 60
           M DYE LR IWW+LIGV+LV F +TDGFDMGVG L+P+I +ND+ERRV+INS+  HW+GN
Sbjct: 1   MLDYETLRFIWWLLIGVILVAFMVTDGFDMGVGCLLPLIARNDDERRVLINSVGAHWEGN 60

Query: 61  QVWLITAGGALFAAWPLVYATSFSGFYLAMIVTLAALWLRPVGLDYRSKIESTKWRNNWD 120
           QVWLI AGGALFAAWP VYA +FSGFY+AMI+ L AL+ RP+  DYR KI + +WR  WD
Sbjct: 61  QVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCALFFRPLAFDYRGKIANARWRALWD 120

Query: 121 LAISASGFIPPVIFGVAFGNLLQGVPFQLSDFLMPTYHGSFFGLLNPFALLCGLVSLFMT 180
             +     +PPV+FG+AFGNL  GVPF  +  L   Y G+F+ LL+PFALLCGL+SL + 
Sbjct: 121 TGLVIGSLVPPVVFGIAFGNLFLGVPFAFTPQLHVDYFGTFWQLLSPFALLCGLLSLSLV 180

Query: 181 LLQGSAWLQMKTTSHVHQRARNVAQLTGLLTAVCFVAAGFWV-QHIDGYMIVGAIDGNAA 239
           ++QG  WLQ+KT   + QRA +  + + LL  +CF+ AG+W+   +DG++++   D N  
Sbjct: 181 IMQGGVWLQLKTEGVIRQRALSATRYSALLIVICFLLAGYWLWAGVDGFVLL-TQDANGP 239

Query: 240 SNPLNKEVIREAGAWLHNFEQVPVLWLAPALGVLMPLLSVLASRLDKGGLAFLTSSLGNA 299
           SNPL K V    GAW+++F + P+L + P LG+++P+L+  A    +    FL +SL  A
Sbjct: 240 SNPLLKGVAILPGAWMNHFIRSPLLLIIPLLGMILPILAFYACLRGQTIRGFLFASLTQA 299

Query: 300 GVIFTAGFAMFPFVMPSSLNPAHSLTMWDATSSKLTLELMTVVAVVMVPIILGYTIWSYY 359
            VIFTAG  +FPFVMPSS++P  SLT+WD+TSS++TLE+M V+ ++ +PI+L YT+WSYY
Sbjct: 300 CVIFTAGITLFPFVMPSSVSPLSSLTVWDSTSSQMTLEIMLVIVLIFLPIVLLYTLWSYY 359

Query: 360 KMFGRLDDKFIEDNKNSLY 378
           KM GR++   +  N + LY
Sbjct: 360 KMLGRINLGTLRRNDHELY 378