Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., cytochrome d oxidase, subunit II (cydB) from Kangiella aquimarina DSM 16071

 Score =  139 bits (351), Expect = 9e-38
 Identities = 98/358 (27%), Positives = 172/358 (48%), Gaps = 38/358 (10%)

Query: 9   LIWWVLIGVLLVGFAITDGFDMGVGALVPIIGKNDNERRVMINSIAPHWDGNQVWLITAG 68
           +IW  LI   ++ + I DGFD+G+G L P I KN  ++   +NS+AP WDGN+ WL+  G
Sbjct: 11  MIWAGLIAFAVLAYIILDGFDLGIGILFPFI-KNKTDQETAMNSVAPIWDGNETWLVLGG 69

Query: 69  GALFAAWPLVYATSFSGFYLAMIVTLAALWLRPVGLDYRSKIESTK-WRNNWDLAISASG 127
           G LFA +PL Y+      Y+ +I+ L  L  R V  ++  + ++++ W   WD       
Sbjct: 70  GGLFAVFPLAYSVIMPALYMPIILMLLGLIFRGVAFEFHWRTKNSQDW---WDRGFFLGS 126

Query: 128 FIPPVIFGVAFGNLLQGVPFQLSDFLMPTYHGSFFGLLNPFALLCGLVSLFMTLLQGSAW 187
            +  +  G+A G L+QG+   ++D     Y G ++  L PF++  G+  +   +L G+ W
Sbjct: 127 LVATLCQGIALGALVQGI--TVAD---RAYAGGWWDWLTPFSITTGIALVVGYVLLGATW 181

Query: 188 LQMKTTSHVHQRARNVAQLTGLLTAVCFVAAGFWVQHIDGYMIVGAIDGNAASNPLNKEV 247
           L MKTT  + +++   A++   LT         W+  I+   +    D   A N     V
Sbjct: 182 LNMKTTDGLQKQSVQFAKIAAWLTLFFIGIISLWMIFIEQQYLHRWFD---APNVYYLMV 238

Query: 248 IREAGAWLHNFEQVPVLWLAPALGVLMPLLSVLASRLDKGGLAFLTSSLGNAGVIFTAGF 307
           +  A      F    +L+       + P L  +A         F+ S +G          
Sbjct: 239 VPVAVL----FCGFKLLYGLHKSREVSPFLYAIA--------LFVLSYIGLL-------I 279

Query: 308 AMFPFVMPSSLNPAHSLTMWDATSSKLTLELMTVVAVVMVPIILGYTIWSYYKMFGRL 365
           + +P ++P       S+++W A +   +L+ + V A  ++PII+GYT ++Y+   G++
Sbjct: 280 SFYPNLVPP------SISIWQAAAPDDSLKFLLVGASALLPIIIGYTSYAYWVFRGKV 331