Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., cytochrome d ubiquinol oxidase subunit II from Erwinia tracheiphila SCR3

 Score =  504 bits (1298), Expect = e-147
 Identities = 242/379 (63%), Positives = 293/379 (77%), Gaps = 1/379 (0%)

Query: 1   MFDYEILRLIWWVLIGVLLVGFAITDGFDMGVGALVPIIGKNDNERRVMINSIAPHWDGN 60
           M  YE+LR +WWVL+GVLL+GFA+TDGFDMGVG L  I+G+ DNERRVMINSIAPHWDGN
Sbjct: 1   MISYELLRFVWWVLVGVLLIGFAVTDGFDMGVGMLSRILGRTDNERRVMINSIAPHWDGN 60

Query: 61  QVWLITAGGALFAAWPLVYATSFSGFYLAMIVTLAALWLRPVGLDYRSKIESTKWRNNWD 120
           QVWLITAGGALFAAWP+VYA +FSGFY+AMI+ L++L+ RP+G DYRSKI   +WR  WD
Sbjct: 61  QVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLSSLFFRPIGFDYRSKIADKRWRGMWD 120

Query: 121 LAISASGFIPPVIFGVAFGNLLQGVPFQLSDFLMPTYHGSFFGLLNPFALLCGLVSLFMT 180
           L I     +PP++FGVAFGNLLQGVPF    +L   Y GSFF LLNPFALL G++SL M 
Sbjct: 121 LGIFVGSAVPPLVFGVAFGNLLQGVPFHADAYLRLFYTGSFFQLLNPFALLVGVISLTMI 180

Query: 181 LLQGSAWLQMKTTSHVHQRARNVAQLTGLLTAVCFVAAGFWVQH-IDGYMIVGAIDGNAA 239
           L QG+ +LQM+T   +H R+R  AQ++ L+  VCFV AG WV + I+GY++V  +D NAA
Sbjct: 181 LTQGATYLQMRTVGELHMRSRAAAQISALVMMVCFVLAGVWVVYGIEGYVVVSTLDHNAA 240

Query: 240 SNPLNKEVIREAGAWLHNFEQVPVLWLAPALGVLMPLLSVLASRLDKGGLAFLTSSLGNA 299
           SNPLNK+V+R+ GAWL NF Q P+LW  PALGV++PLL+V  SR +KG LAF+ SSL  A
Sbjct: 241 SNPLNKQVVRQTGAWLVNFNQTPLLWSIPALGVVLPLLTVFCSRFEKGALAFVFSSLTLA 300

Query: 300 GVIFTAGFAMFPFVMPSSLNPAHSLTMWDATSSKLTLELMTVVAVVMVPIILGYTIWSYY 359
            VI TAG AMFPF+MPSS  P  SLTMWD TSS LTL++M V A++ VPIIL YT W YY
Sbjct: 301 CVIATAGVAMFPFIMPSSTVPDISLTMWDTTSSFLTLKIMAVTAIIFVPIILAYTAWCYY 360

Query: 360 KMFGRLDDKFIEDNKNSLY 378
           KM GRL  + IE N +SLY
Sbjct: 361 KMAGRLTKEQIEANTHSLY 379