Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., cytochrome d oxidase, subunit II (cydB) from Enterobacter asburiae PDN3

 Score =  155 bits (391), Expect = 2e-42
 Identities = 103/365 (28%), Positives = 164/365 (44%), Gaps = 42/365 (11%)

Query: 7   LRLIWWVLIGVLLVGFAITDGFDMGVGALVPIIGKNDNERRVMINSIAPHWDGNQVWLIT 66
           + +IW+ +I    + + I DGFD+G+G L   +G +  ER VM+NS+AP WDGN+ WL+ 
Sbjct: 5   ISVIWFAIIVFATLMYIIMDGFDLGIGLLFNFVG-DAKERDVMVNSVAPVWDGNETWLVL 63

Query: 67  AGGALFAAWPLVYATSFSGFYLAMIVTLAALWLRPVGLDYRSKIESTKWRNNWDLAISAS 126
            G  LF A+PL YA       + +   L  L  R V  ++R K  +   R  WD + +  
Sbjct: 64  GGAGLFGAFPLAYAVIVDALTIPLTAMLIGLIFRGVAFEFRFK-ATPSHRKFWDYSFAGG 122

Query: 127 GFIPPVIFGVAFGNLLQGVPFQLSDFLMPTYHGSFFGLLNPFALLCGLVSLFMTLLQGSA 186
             +     G+  G ++ G   +   F+     GS    L PF L CG+  +    L G+ 
Sbjct: 123 SLLATFSQGIVVGAMINGFDVEGRRFV-----GSALDWLTPFNLFCGIGLVVAYTLLGTT 177

Query: 187 WLQMKTTSHVHQRARNVAQLTGLLTAVCFVAAGFWVQHIDGYMIVGAIDGNAASNPLNKE 246
           WL MK+   +  R R + +   L   V       W                    PL  +
Sbjct: 178 WLIMKSEGALQARMRELTRHVLLALMVVIAVVSIW-------------------TPLGWQ 218

Query: 247 VIREAGAWLHNFEQVPVLWLAPALGVLMPLLSVLASRLDKGGLAFLTSSLGNAGVIFTA- 305
            + +    L NF      W  P + +L+ L SVL  RL +   +     L   G+IF   
Sbjct: 219 YVADRWFTLPNF-----FWFLP-VPLLVGLFSVLIWRLTRNPASHSRPFLLTLGLIFLGF 272

Query: 306 ---GFAMFPFVMPSSLNPAHSLTMWDATSSKLTLELMTVVAVVMVPIILGYTIWSYYKMF 362
              G +++P ++P        +T+W+A +   +   M V  ++++P+IL YT WSYY   
Sbjct: 273 SGLGISLWPNIIPP------RITLWEAAAPPASQLFMLVGTLLIIPVILVYTAWSYYVFR 326

Query: 363 GRLDD 367
           G++ D
Sbjct: 327 GKVSD 331