Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., Cytochrome d ubiquinol oxidase subunit 2 from Alteromonas macleodii MIT1002

 Score =  116 bits (290), Expect = 1e-30
 Identities = 101/367 (27%), Positives = 160/367 (43%), Gaps = 46/367 (12%)

Query: 5   EILRLIWWVLIGVLLVGFAITDGFDMGVGALVPIIGKNDNERRVMINSIAPHWDGNQVWL 64
           E+L  I+  L+G+ ++ +AI DG+D+GVG L+P   + +  R  MI SI P+WD N+ WL
Sbjct: 8   EMLGNIYVGLLGLSVLLYAILDGYDLGVGVLIP--PRTEAFRDDMIASIGPYWDANETWL 65

Query: 65  ITAGGALFAAWPLVYATSFSGFYLAMIVTLAALWLRPVGLDYRSKIESTKWRNNWDLAIS 124
           + A G L  A+P  ++      YL     L  L +R V  D+R+K+   K +  WD+   
Sbjct: 66  VLAIGLLLIAFPEAHSEFLQTLYLPATFMLLGLIMRGVAFDFRAKVVQVK-KRKWDMVFK 124

Query: 125 ASGFIPPVIFGVAFGNLLQGVPFQLSDFLMPTYHGSFFGLLNPFALLCGLVSLFMTLLQG 184
               +  +  G   G  + G        L        F LL  F +      +      G
Sbjct: 125 YGSLLTTLAQGYMLGIYVTG--------LRTDIWAQGFALLAAFGVTAAYAFI------G 170

Query: 185 SAWLQMKTTSHVHQRARNVAQLTGLLTAVCFVAAGFWVQHIDGYMIVGAIDGNAASNPLN 244
           S WL +K    + Q+A                   +W +   G + VG +  + A+  L+
Sbjct: 171 SCWLILKGEGELQQKAY------------------YWARRGLGVLAVGIVAVSIANLTLH 212

Query: 245 KEV--IREAGAWLHNFEQVPVLWLAPALGVLMPLLSVLASRLDKGGLAFLTSSLGNAGVI 302
            +V  +  +  W +    +PV   A  L +   LL  L     KG       +L    + 
Sbjct: 213 DDVRDLWLSAPWGYVLFAIPVACFA-LLALCGVLLKKLPDAQGKGEWLPFFIALLVFLLC 271

Query: 303 FTA-GFAMFPFVMPSSLNPAHSLTMWDATSSKLTLELMTVVAVVMVPIILGYTIWSYYKM 361
           FTA G + +PF++P        +T+ DA S   +L  + V  V++VPIIL YT    YK+
Sbjct: 272 FTAFGISYYPFIIPG------QMTVMDALSDASSLRFLLVGVVIVVPIILAYTA-MVYKI 324

Query: 362 FGRLDDK 368
           F    +K
Sbjct: 325 FSGKSEK 331