Pairwise Alignments

Query, 450 a.a., protein TolB from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., Tol-Pal system protein TolB from Xanthobacter sp. DMC5

 Score =  213 bits (541), Expect = 1e-59
 Identities = 132/437 (30%), Positives = 223/437 (51%), Gaps = 27/437 (6%)

Query: 15  GFSNIANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIASDLQRSGKFSPVPT 74
           GF      A  + IT G     PIAI      G  +L  ++S VI SDL+R G F+P+  
Sbjct: 53  GFGAAHAQAARIEITPGAFKPIPIAITDLL--GEPELGRNISGVITSDLRRCGLFAPIDP 110

Query: 75  SKMPQTPYSEEQVNFGKWTSMGVDSLLTGTITQNAEGSYVISYQLVDIVRGQLTQGQSKA 134
               +   + +   F  W  +   +LLTG +T+ A+G   + ++L D+  GQ    Q   
Sbjct: 111 KAFVEQITNPDTPRFQDWRVINAQALLTGRVTRQADGRVQVVFRLWDVFAGQQLAAQ--- 167

Query: 135 LSQDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGERGAFLTRIAYVVVND 194
                Q V   ++              R  AH +AD +YE++TGE+G F TRI +V  + 
Sbjct: 168 -----QFVAQPEN-------------WRRIAHIVADAIYEKMTGEKGYFDTRIVFVDESG 209

Query: 195 -KDPYPYQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVSFQNGQAEIYMMNIYS 253
            K+    +L I D DG N   + R    +++P +SP  Q + Y+S+  G  +++++NI +
Sbjct: 210 PKERRIKRLAIMDQDGANVSYLTRGDSLVLTPRFSPTSQEITYMSYGQGDPKVFLLNIET 269

Query: 254 GKREKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLTEVTSGRSNNTEP 313
           G+RE + +FP  + +PRF+PDG+ + + L + GN  ++ MDL +R  T +T   + +T P
Sbjct: 270 GQREIVGNFPGMSFSPRFAPDGQKVIMSLQQGGNSNIFVMDLRSRATTRLTDTAAIDTAP 329

Query: 314 FWHPDGKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNLGGQITPDGKFLVMVNRSD 373
            + PDG+ + F SDRGG  QIY +N  G   KR+++  ++      +P G ++    +++
Sbjct: 330 CYSPDGRQICFESDRGGTSQIYVMNADGSGAKRISFGNARYSTPVWSPKGDWIAYTRQAE 389

Query: 374 SGFNLAKQDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYNKANVLSMVSID--GRFK 431
             F +     +    ++LT+   +E P+  PNG ++++      A+  S+ ++D  G  +
Sbjct: 390 GRFAIGVMRTDGSGERVLTEGYHNEGPTFCPNGRVLMFFRDPGGASGPSLYTVDVTGYNE 449

Query: 432 ARLPATNGRVRAPAWSP 448
            RLP T      PAWSP
Sbjct: 450 QRLP-TPSYGSDPAWSP 465