Pairwise Alignments

Query, 450 a.a., protein TolB from Vibrio cholerae E7946 ATCC 55056

Subject, 899 a.a., Tol-Pal system protein TolB from Xanthobacter sp. DMC5

 Score = 50.8 bits (120), Expect = 2e-10
 Identities = 73/274 (26%), Positives = 111/274 (40%), Gaps = 45/274 (16%)

Query: 125 GQLTQGQSKALSQDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGERGAFL 184
           G++T   S A    G    +      N + T   S++  Y+ + ++LV  +  G    F+
Sbjct: 388 GEVTLASSSATGDVGNQASTA-----NIIFTQDGSKVEFYS-KASNLVPGDTNGTSDIFV 441

Query: 185 TRIAYVVVNDKDPYPYQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVSFQNGQA 244
             IA   ++  DP          D  N+ +V   K      A S DG  + +     G  
Sbjct: 442 KDIATGAISRIDPN---------DPNNQDIVNGFK------AISSDGSKIVFDGAGIGSP 486

Query: 245 E-IYMMNIYSGKREKLTSFPRHNGAPRFSPDGKTLALVL--------SKTGNLQVYTMDL 295
             I++ ++ +G    +     +N    FSPDG  +A +         S  GN+Q+Y  DL
Sbjct: 487 HSIFIQDVATGDVTFVCYGNVYNQNLAFSPDGTKIAFLSYPQDVSPGSNPGNMQLYVKDL 546

Query: 296 ATRRLTEVTS------GRSNNTEPF-WHPDGKSLIFTS------DRGGKPQIYQVNLSGG 342
           AT +LT  +S      G S  TE F + PDG  + FTS         G   I+  +L  G
Sbjct: 547 ATGQLTVESSDSAGHVGNSATTEAFSFSPDGTKIAFTSYSTNLVPGQGFNGIFIKDLQTG 606

Query: 343 ETKRLTWQGSQNLGGQI-TPDGKFLVMVNRSDSG 375
               LT   S      + TPDG  L+  + SD G
Sbjct: 607 AITELTVDASSYSSHPVFTPDGAHLIFTS-SDIG 639



 Score = 32.0 bits (71), Expect = 9e-05
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)

Query: 226 AWSPDGQTLAYVSFQN------GQAEIYMMNIYSGKREKLT-SFPRHNGAPRFSPDGKTL 278
           ++SPDG  +A+ S+        G   I++ ++ +G   +LT     ++  P F+PDG  L
Sbjct: 572 SFSPDGTKIAFTSYSTNLVPGQGFNGIFIKDLQTGAITELTVDASSYSSHPVFTPDGAHL 631

Query: 279 ALVLSKTGNLQVYTMDLATRRLTEVTS 305
               S  G     ++ +A+   T VTS
Sbjct: 632 IFTSSDIGPTYGGSILMASLPATSVTS 658