Pairwise Alignments

Query, 450 a.a., protein TolB from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., Tol-Pal system beta propeller repeat protein TolB from Sphingobium sp. HT1-2

 Score =  156 bits (394), Expect = 1e-42
 Identities = 123/445 (27%), Positives = 208/445 (46%), Gaps = 39/445 (8%)

Query: 20  ANAALELVITDGIDSARPIAI--VPFKWEGAT------KLPEDVSAVIASDLQRSGKFSP 71
           A A L + +T  IDS   IA+  +P + + AT      +L   ++ VIA+DL+ SG F P
Sbjct: 24  ALAQLSVDVTGDIDSNLKIAVPALPAQQDVATPAGTANELGRKIAEVIATDLKGSGLFDP 83

Query: 72  VPTSKMPQTPYSE-EQVNFGKWTSMGVDSLLTGTI-TQNAEGSYVISYQLVDIVRGQLTQ 129
              + MP   + E     + KW +    +L+ G + T   E    +   L D+   Q   
Sbjct: 84  SGPAGMPALAFPEVTNPIYDKWGAY--QALVQGFVRTTGGEADITVGCYLYDVALKQ--- 138

Query: 130 GQSKALSQDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGERGAFLTRIAY 189
                L++ G +V  +D               R  AH+ AD +Y  L+GE   F +RIAY
Sbjct: 139 ----ELTRQGYVVAPRD--------------WRRAAHKCADAIYARLSGESPFFDSRIAY 180

Query: 190 VVVND-KDPYPYQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVSFQNGQAEIYM 248
           +  +  KD    +L I D DG N R +   +   ++P +SPD +++ YVS+   +  IY+
Sbjct: 181 IAESGPKDNRVKRLAIMDSDGANHRFITNGQSIALTPRFSPDYKSIVYVSYLGSRVRIYV 240

Query: 249 MNIYSGKREKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLTEVTSGRS 308
            +I +G++  +T       APR+SPDG+ +   ++ +GN  +Y +         +T+   
Sbjct: 241 YDIGTGQQRLVTESNNTTFAPRWSPDGRNILFSMAVSGNTDIYRVSAQGGAPVRLTNSPG 300

Query: 309 NNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNLGGQITPDGKFLVM 368
            +    + PDG+ ++F SDR G  QIY +N  G   +R++  G +    + +P G  L+ 
Sbjct: 301 IDVGGSYSPDGRQIVFESDRSGGQQIYVMNADGSNQRRISHGGGRYATPEWSPRGD-LIA 359

Query: 369 VNRSDSGFNLAKQDLETGAMQILTKTLLDESPSIAPNGGMVIY---SSIYNKANVLSMVS 425
             +    F +A         +ILT    DE P+ +PNG ++ +   +     ++ +  V 
Sbjct: 360 FTKLSGDFKIAVMTPSGDNERILTNGWQDEQPTWSPNGRVLQFFRTTPGRQGSSQVWQVD 419

Query: 426 IDGRFKARLPATNGRVRAPAWSPFL 450
           + G  + R+P T      PAW P L
Sbjct: 420 LTGVNERRIP-TPLSGSDPAWGPLL 443